Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01863 ATGATGACGATGATCTTTAATGGATACACAGATGATTTCTCATGGATTTGTCTGAAGGATTTTGAGTTCACTTCTTTCTGTTCCCAAAGAACCACAATAGACACAATAAATCTACTTTTCGTCTGTGTTTTCTACGCTTCTACGATTGTCAGTTTAATCAGAAGAAATGTTATAAATGGAAGTCATAGCAAAAGCAAGCTTTTCCTTACTGTCTCTATCTGTTGTGCTATCACTAGCATCGCGTTTTACAGTATTGGCTTGTGGAATCTCATTGCCAAAACTGGTAACTCCATGGCTAACTTAGCATGCATCGTAAGAGGATTTGTTTGGACTTCTTTGGCAGTTTCTTTGCTTGTTCAGAGACACAAATGGATCAAAATTCTAAACTCTGTCTGGTGGGCATGTTCCTGTGCACTAGTTTCAGCTCTCGACATTGAAATTCTGTTCAGAAAGCATGCAATAGAAATTTTCGATGTCCTACTATGGATCTTGCACACACTTGTTCTCTTCTGTGCCTTCCAAAATCTTGGTTATTTTGTCACTCAAAGTGTGTCAAAAAGTTTGTCTGAGCCATTGTTAGCTCAGGAATTTGACACAGAAGAAACAGGACTAGGCCGTGCTTCCTTTCTGAGCAAGTTGACCTTCTCTTGGGTTAACTCCTTACTCAGTCTGGGTTACTCAAAGCCACTATCTCTTGAAGACATCCCTTCCCTTCTCTCTGAAGATAAAGCAGAATTGTCCCACCAAAACTTCATGCATGCATGGGAATCCCTTGTGTGTGAGAGAAGCAAGAACAATACCAAGAACTTGGTGCTTTGGTCCATTGTTAGAACTCACTTCAAAGAGAACGTATTAATAGCTTTTTATGCATTACTCAGAACCATTGCTGTGGTTGTTTCTCCTTTAATAATCTATGCTTTTGACAACTTTTCAAATGGTAGGGATAGTGAGGATACAGATCTCAAAGAAGGTCTTACCATAGTGGGTTTTCTTATTCTCTTCAGAGTGGTTGATTTTGTGTCCCAGAGACATTGGTTTTTTCATTCCACGAGATCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAACTAAAGCTTTCAAGCTCAGCAAGGACAAGACACTCGGCAGGTGAAATTGTGAATTACATTGCAGTTGATGCATATCGCATGGGAGAATTTCCACGGTGGTTTCATATAACATGGGCATGTACATTGCAACTTATCCTATCTATAGGTATCCTTTATGGAGTTGTGGGAGTTGGTGCTCTTGCTGGTTTAGTCCCTCTTCTTATATGTGGACTTATCAATGTACCATTTGCCAAGATCCTACAAAAATGCATAGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGAGCAACTTCAGAAATTCTAAACAGCATGAAAATCATTAAGTTACAGTCCTGGGAAGACAAATTCAAGAGTTTGGTTGAAAACCTACGTGGGAAAGAGTTCATTTGGCTATCTAAGGCACAGATCCTGAAAGCTTTTGGCTCATTTTTGTATTGGATATCTCCTACCATCGTTTCTGCTGTTGTTTTCCTGGGTTGTGCTGCTTTCAATAGTGCTCCATTGAATGCTGGGACCATATTTACAGAACTAGATAGCAGTGATGATAGTAGAAGACATATAAACCGAAGTTCAGTTAATGCAGTTGAAATCCAAGGTGGCAACTTCATTTGGGACCATGAATCAGTGTCCCCAACTTTGAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAGTTGCAGTTTGTGGGCCAGTTGGAGCCGGAAAATCATCTCTTTTGTATGCAGTACTGGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGTGTCCAGCAACATAGCACATGTTTCTCAAACCTCTTGGATACAAAGTGGGACGGTTCAAGATAATATACTCTTTGGCAAGCCGATGGAAAAAACAAGATATGAGAGTGCCATTAAAGTTTGTGCTTTGGATAAAGATATCAATGATTTCAGCCACGGTGATCTTACAGAAATAGGGCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCTGTCTACAATGATGCTGACATTTACCTCCTCGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTTTTCAAAGACTGCGTAATGACGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACACATCAAGTGGAGTTTCTCTCAGAAGTTGATGCAATCCTGGTAATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGAGAATCTCTTAACAGCTGGGACTGCCTTTGAACAACTTGTGAGTGCGCATAAGGAAGCAATTACTGAGTTGGATCAGAATAATGAGAACAAAACTCAGAGAGAAGAGTCTGAAGGTGTTTATCTAACTAAAAATCAGAGTGAGGAGGAGATTTCTACAGAGGGTCAACTTGGGATACAGCTTACACAAGAAGAAGAAAAAGAGATAGGTGATGTTGGCTTGAAGGCATTCTGGGATTATATTTCATTTTCCAGGGGTTCATTGATGCTGTCATGGATACTTTTGGCACAATTTGCTTTTATTGCTTTGCAGACTGCATCAATGGTTTGGCTTGCTTTAGCCATTGAAATTCCAAAAATAACTAGTGCCACCTTGATTGGGGTGTACTCTTTAATCTCATTTGCTAGTGCTGCGTTTGTATATGTAAGGTCTCTCTTGACCTCTTACCTCGGATTAAAAGCTTCTAAAGCTTTCTTCATAAGTTTCAATACTGCTATCTTCAATGCTCCTATGCTGTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACGAGAGCTTCATCAGATTTAAGTATTTTGGACTTTGATATACCTTATTCGATCACCTTTGTAGCATCTGTAGCAATTGAAATTTTGGTGACGATTTGTGTAATGGTTTTTGTAACATGGCCAGTTCTCATTGTTGCCATTCCTGCCATAGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCGTCAAGGGAGTTGACGAGGATCAATGGAACCACAAAAGCTCCTGTAATGAATTTTGCAGCTGAGACATCACTTGGTGTGGTTACTGTGAGAGCATTTAATATTGTAGAAAGATTTTTTAAGACTTACTTAAAGCTTGTGGACACAGACGCAACACTGTTTTTTCATTCTAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTTCAGCTTTGCTACTTATTCTATTTCCTCAGGGATACGTGTCCACGGGCCTTGTGGGACTATCTCTCTCTTATGCTTTAAGCTTCACAGCAGCCTACACATTTTGGACTCGATGGTATTGCAATTTATTAAACTATGTTATATCTGTTGAAAGAATCAAGCAATTCATTCACCTACCATCAGAGCCTCCTGCCATTGTGAAGGACCACCGACCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATTAGATATCGTCCTAATGCTCCATTAGTACTTAAGGGTATCACTTGTATGTTTAGAGAAGGGAGTAGAGTGGGAGTTGTGGGAAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAAGGGGTGATATTCTTATAGATGGGATTAGCATATGCTCCATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGAGATATGGAAGGCTTTGGAGAAATGCCAGCTTAAGGAAACTATCAGCCATCTACCAAATCTCTTAGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGGCAACTGTTTTGTCTGGGAAGAGTACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACTGATGCAATTCTACAAAGAATTATCAGACAAGAGTTTGCAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTCTCCTATGGAAAAGTGGTGGAATATGATGAACCTTCAAGATTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGGCCAGCTGCAGCAAGAATTCCTCCTAA 4260 0.4047 MMTMIFNGYTDDFSWICLKDFEFTSFCSQRTTIDTINLLFVCVFYASTIVSLIRRNVINGSHSKSKLFLTVSICCAITSIAFYSIGLWNLIAKTGNSMANLACIVRGFVWTSLAVSLLVQRHKWIKILNSVWWACSCALVSALDIEILFRKHAIEIFDVLLWILHTLVLFCAFQNLGYFVTQSVSKSLSEPLLAQEFDTEETGLGRASFLSKLTFSWVNSLLSLGYSKPLSLEDIPSLLSEDKAELSHQNFMHAWESLVCERSKNNTKNLVLWSIVRTHFKENVLIAFYALLRTIAVVVSPLIIYAFDNFSNGRDSEDTDLKEGLTIVGFLILFRVVDFVSQRHWFFHSTRSGLKMRSALMVAVYKKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPRWFHITWACTLQLILSIGILYGVVGVGALAGLVPLLICGLINVPFAKILQKCIAQFMISQDERLRATSEILNSMKIIKLQSWEDKFKSLVENLRGKEFIWLSKAQILKAFGSFLYWISPTIVSAVVFLGCAAFNSAPLNAGTIFTELDSSDDSRRHINRSSVNAVEIQGGNFIWDHESVSPTLRDVNLEIKWGQKVAVCGPVGAGKSSLLYAVLGEIPKISGTVNVSSNIAHVSQTSWIQSGTVQDNILFGKPMEKTRYESAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFKDCVMTALREKTVILVTHQVEFLSEVDAILVMEGGKVTQSGNYENLLTAGTAFEQLVSAHKEAITELDQNNENKTQREESEGVYLTKNQSEEEISTEGQLGIQLTQEEEKEIGDVGLKAFWDYISFSRGSLMLSWILLAQFAFIALQTASMVWLALAIEIPKITSATLIGVYSLISFASAAFVYVRSLLTSYLGLKASKAFFISFNTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVAIEILVTICVMVFVTWPVLIVAIPAIVASKYVQGYYQASSRELTRINGTTKAPVMNFAAETSLGVVTVRAFNIVERFFKTYLKLVDTDATLFFHSNVAMEWLVLRIEALQNLTVITSALLLILFPQGYVSTGLVGLSLSYALSFTAAYTFWTRWYCNLLNYVISVERIKQFIHLPSEPPAIVKDHRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCMFREGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGISICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISHLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSRLMDTNSSFSKLVAEYWASCSKNSS* 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01863 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1177 1409 IPR003439 GO:0005524
Phac10g01863 1419 Pfam ABC transporter 1192 1340 IPR003439 GO:0005524
Phac10g01863 1419 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 206 1411 - -
Phac10g01863 1419 Pfam ABC transporter 582 716 IPR003439 GO:0005524
Phac10g01863 1419 SUPERFAMILY ABC transporter transmembrane region 272 542 IPR036640 GO:0005524|GO:0016020
Phac10g01863 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 566 787 IPR003439 GO:0005524
Phac10g01863 1419 Coils Coil 785 805 - -
Phac10g01863 1419 Pfam ABC transporter transmembrane region 892 1122 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01863 1419 Pfam ABC transporter transmembrane region 288 544 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01863 1419 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 544 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01863 1419 FunFam ABC transporter C family member 3 1158 1409 - -
Phac10g01863 1419 CDD ABC_6TM_ABCC_D2 857 1150 IPR044726 GO:0140359
Phac10g01863 1419 FunFam ABC transporter C family member 5 825 1156 - -
Phac10g01863 1419 ProSitePatterns ABC transporters family signature. 689 703 IPR017871 GO:0005524|GO:0016887
Phac10g01863 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 562 786 IPR027417 -
Phac10g01863 1419 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 863 1125 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01863 1419 CDD ABC_6TM_ABCC_D1 285 544 IPR044746 GO:0140359
Phac10g01863 1419 FunFam Multidrug resistance protein associated1 543 807 - -
Phac10g01863 1419 CDD ABCC_MRP_domain2 1173 1393 - -
Phac10g01863 1419 Gene3D ABC transporter type 1, transmembrane domain 256 543 IPR036640 GO:0005524|GO:0016020
Phac10g01863 1419 Gene3D - 544 814 IPR027417 -
Phac10g01863 1419 Gene3D ABC transporter type 1, transmembrane domain 828 1156 IPR036640 GO:0005524|GO:0016020
Phac10g01863 1419 FunFam ABC transporter C family member 10 267 548 - -
Phac10g01863 1419 CDD ABCC_MRP_domain1 564 764 - -
Phac10g01863 1419 SUPERFAMILY ABC transporter transmembrane region 848 1157 IPR036640 GO:0005524|GO:0016020
Phac10g01863 1419 SMART AAA_5 1201 1394 IPR003593 GO:0016887
Phac10g01863 1419 SMART AAA_5 591 764 IPR003593 GO:0016887
Phac10g01863 1419 Gene3D - 1158 1409 IPR027417 -
Phac10g01863 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1165 1408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01863 Phac-Chr10 41113881 41120019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01863 551 808 Calmodulin-binding Proteins AT2G36910 26.148 3.34e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01863 - - gmx:100784827 2351.63