Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01861 ATGATGACGATGATCTTTAATGGATACACAGATGATTTCTCATGGATTTGTCTGAAGGATTTTGAGTTCACTTCTTTCTGTTCCCAAAGAACCACAATACACACAATAAATCTACTTTTCGTCTGTGTTTTCTACGCTTCTACGATTGTCAGTTTAATCAGAAGAAATTTTATAAATGGAAGTCATAGCAGAAGCAAGTTTTTCCTTATTGTCTCTGTCTGTTGTGCTATCACTAGCATCGTGTTTTACAGTATTGGCTTGTGGAATCTCATTGCCAAAACCGGTAACTCCATGGCTAACTTAGCATGCATCGTAAGAGGATTTGTTTGGACTTCTTTGGCAGTTTCTTTGCTTGTTCAGAGACACAAATGGATCAAAATTATAAACTCTGTCTGGTGGGCATGTTCCTGTGCACTAGTTTCAGCTCTCGACATTGAAATTCTGTTCAGAAAGCATGCAATCGAAATTTTCGATGTCCTACTATGGCTCTTGCACACACTTCTTCTCTTCTGTGCCTTCCAAAATCTTGGTTACTTTGTCACTCAAAGTGTGTCAAAAAGTTTGTCTGAGCCATTGTTAGCTCAGGAATTTGACACAGAAGAAACAGGACTAGGCTGTGCTTCCTTTCTGAGCAAGTTGACCTTCTCTTGGGTTAACTCCTTACTCAGTCTGGGTTACTCAAAGCCACTATCTCTTGAAGACATCCCTTCCCTTCTTTCCGAAGATAAAGCAGACTTGTCCCACCAAAACTTCATGCATGCATGGGAATCCCTTGTGTGTGACAGAAGCAAGAACAATACCAAGAACTTGGTGCTTTGGTCCATTGTTAGAACTCACTTAAAAGAGAACGTATTAATAGCTTTTTATGCATTACTCAGAACCATTGCTGTGGCTGTTTCTCCTTTAATAATCTATGCTTTTGTCAACTTTTCAAATGGTAGGGATAGTGAGGATACAGATCTCAAAGAAGGTCTTACCATAGTGGGTTTTCTTATTCTCTCCAGAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTCATTCCAGGAGATCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTCTATAAAAAACAACTAAAGCTTTCAAGCTCAGCAAGGAGAAGATACTCGGCAGGTGAAATTGTGAATTACATTGCAGTTGATGCATATCGCATGGGAGAATTTCCATGGTGGTTTCACATAACATGGGCATGTACATTGCAAGTTCTCCTATCTATAGGCATCCTTTATGGAGTTGTGAGAGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATTTGTGGACTTCTCAATGTACCATTTGCCAAGATCCTACAAAAATGCATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGAGCAACTTCAGAAATTCTAAACAGCATGAAAATCATTAAGTTACAGTCCTGGGAAGACAAATTCAAGAGTTTGGTTGAGAACCTACGTGCGAAAGAGTTCATTTGGCTATCTAAGGCACAGATCATGAAAGCTTATGGCTCATTTTTATATTGGATGTCTCCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTGCTTTCAATAGTGCTCCATTGAATGCTGGGACCATTTTTACAGTTCTTGCAACGTTGAGGAACCTGTCAGAACCTGTTCGAATGATTCCGGAGGCTCTATCTATTATGATCCAAGTTCAGGTATCTTTTGATCGTCTCAATACCTTTTTGCTTGATGAGGAACTAGATACCAGTGGTGATAACAAAAGACATATAAACCGAAGTTCAATTAATGCGGTAGAAATCCAAGGTGGCAACTTCATTTGGGACCATGAATCAGTGTCTCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAGTTGCAGTTTGTGGGCCAGTAGGAGCTGGAAAATCATCCCTTTTGTATGCATTACTGGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGTGTCCAGCAACATAGCATATGTTTCTCAAACCTCTTGGATACAAAGTGGGACGGTTCAAGATAATATACTCTTTGGCAAGCCGATGGACAAAACAAGATATGAGAGTGCCATTAAAGTTTGTGCTTTGGATAAAGATATCAATGATTTTAGCCACGGTGATCTTACAGAAATAGGGCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCTGTCTACAATGATGCTGACATTTACCTCCTCGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTTTTCAAAGACTGCGTAATGACGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACACATCAAGTGGAGTTTCTCTCAGAAGTTGATGAAATCCTGGTGATGGAAGGTGGAGAAGTTACTCAATCAGGTAACTATGAGAATCTCTTAACAGCTGGGACTTCCTTTGAACAACTTGTGAGCGCGCATAAGGAAGCAATTACAGAGTTGGATCAGAATAATGAGAACAAAACTCAGAGAGAAGATTCTGAAGGTGTTTATCTACCTAAAAATCAAAGTGAGGGGGAGATTTCTACCGAGGGTCAACATGGGATACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTTGAAGACATTATGGGATTATATTTCATTTTCCAGGGGTTCATTGATGCTGTCATGGATACTGTTGGCACAATTTGCTTTTATTGCTTTGCAGACTGCATCAATGGTTTGGCTTGCTTTATCCATTGATATTCCAAAAATAACTAGTGCCACCTTGATTGGGGTTTACTCTATAATCTCATTTGCTAGTGTTGGGTTTATGTATGTAAGGTCTCTCTTGACCTCTTACCTCGGATTAAAAGCTTCTAAAGCTTTCTTCACAAGTTTCAATACTGCTATCTTCAATGCTCCCATGCTGTTCTTTGACTCAACTCCTGTAGGAAGGATTTTAACGAGAGCTTCATCAGATTTAAGTATTTTGGACTTTGATATACCCTATTCGATCACCTTTGTAGCATCTGTAGCAATTGAAATTTTGGTGATGATTTCTGTAATGGTTTTTGTAACATGGCCAGTTCTCATTGTTGCCATTCCTGCAATAGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCGTCAAGGGAGTTGACGAGGATCAATGGAACCACAAAAGCTCCTGTAATGAATTTTGCAGCTGAGACATCACTTGGTGTGGTTACTGTGAGAGCATTTAATATGGTAGAAAGATTTTTTAAGAATTACTTAAAGCTTGTGGACACAGACGCAACACTGTTTTTTCATTCTAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTTCAGCTTTGCTACTTATTCTATTTCCTCAGGGATACGTGTCCACGGGCCTTGTGGGACTATCTCTCTCTTATGCTTTAAGCTTCACAGCAGCCTACACATTTTGGACTCGATGGTATTGCAATTTATTAAACTATGTTATATCTGTTGAAAGAATCAAGCAATTCATTCACCTACCATCAGAGCCTCCTGCCATTGTGAAGGACCACCGACCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATTAGATATCGTCCTAATGCTCCATTAGTACTTAAGGGTATCACTTGTATGTTTAGAGAAGGGAGTAGAGTGGGAGTTGTGGGAAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAAGGGGTGATATTCTTATAGATGGGATTAGCATATGCTCCATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGAGATATGGAAGGCTTTGGAGAAATGCCAGCTTAAGGAAACTATCAGCCATCTACCAAATCTCTTAGACTCTTTGGGTGGAAATTGGAGCTTGGGACAACGACAACTGTTTTGTCTAGGAAGAGTACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACTGATGCAATTCTACAAAGAATTATCAGACAAGAGTTTGCAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTCTCCTATGGAAAAGTGGTGGAATATGATGAACCTTCAAGATTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGGCCAGCTGCAGCAAGAATTCCTCCTAA 4365 0.4048 MMTMIFNGYTDDFSWICLKDFEFTSFCSQRTTIHTINLLFVCVFYASTIVSLIRRNFINGSHSRSKFFLIVSVCCAITSIVFYSIGLWNLIAKTGNSMANLACIVRGFVWTSLAVSLLVQRHKWIKIINSVWWACSCALVSALDIEILFRKHAIEIFDVLLWLLHTLLLFCAFQNLGYFVTQSVSKSLSEPLLAQEFDTEETGLGCASFLSKLTFSWVNSLLSLGYSKPLSLEDIPSLLSEDKADLSHQNFMHAWESLVCDRSKNNTKNLVLWSIVRTHLKENVLIAFYALLRTIAVAVSPLIIYAFVNFSNGRDSEDTDLKEGLTIVGFLILSRVVDSVSQRHWFFHSRRSGLKMRSALMVAVYKKQLKLSSSARRRYSAGEIVNYIAVDAYRMGEFPWWFHITWACTLQVLLSIGILYGVVRVGALPGLVPLLICGLLNVPFAKILQKCMAQFMISQDERLRATSEILNSMKIIKLQSWEDKFKSLVENLRAKEFIWLSKAQIMKAYGSFLYWMSPTIVSAVVFLGCAAFNSAPLNAGTIFTVLATLRNLSEPVRMIPEALSIMIQVQVSFDRLNTFLLDEELDTSGDNKRHINRSSINAVEIQGGNFIWDHESVSPTLRDVNLEIKWGQKVAVCGPVGAGKSSLLYALLGEIPKISGTVNVSSNIAYVSQTSWIQSGTVQDNILFGKPMDKTRYESAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFKDCVMTALREKTVILVTHQVEFLSEVDEILVMEGGEVTQSGNYENLLTAGTSFEQLVSAHKEAITELDQNNENKTQREDSEGVYLPKNQSEGEISTEGQHGIQLTQEEEKEIGDVGLKTLWDYISFSRGSLMLSWILLAQFAFIALQTASMVWLALSIDIPKITSATLIGVYSIISFASVGFMYVRSLLTSYLGLKASKAFFTSFNTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVAIEILVMISVMVFVTWPVLIVAIPAIVASKYVQGYYQASSRELTRINGTTKAPVMNFAAETSLGVVTVRAFNMVERFFKNYLKLVDTDATLFFHSNVAMEWLVLRIEALQNLTVITSALLLILFPQGYVSTGLVGLSLSYALSFTAAYTFWTRWYCNLLNYVISVERIKQFIHLPSEPPAIVKDHRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCMFREGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGISICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISHLPNLLDSLGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSRLMDTNSSFSKLVAEYWASCSKNSS* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01861 1454 FunFam ABC transporter C family member 5 863 1195 - -
Phac10g01861 1454 SUPERFAMILY ABC transporter transmembrane region 887 1196 IPR036640 GO:0005524|GO:0016020
Phac10g01861 1454 ProSitePatterns ABC transporters family signature. 728 742 IPR017871 GO:0005524|GO:0016887
Phac10g01861 1454 FunFam Multidrug resistance protein associated1 581 846 - -
Phac10g01861 1454 Gene3D - 610 853 IPR027417 -
Phac10g01861 1454 Pfam ABC transporter transmembrane region 930 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01861 1454 Pfam ABC transporter transmembrane region 285 548 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01861 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 825 IPR027417 -
Phac10g01861 1454 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 207 1446 - -
Phac10g01861 1454 CDD ABC_6TM_ABCC_D2 896 1189 IPR044726 GO:0140359
Phac10g01861 1454 FunFam ABC transporter C family member 10 267 584 - -
Phac10g01861 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 568 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01861 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 826 IPR003439 GO:0005524
Phac10g01861 1454 FunFam ABC transporter C family member 3 1197 1444 - -
Phac10g01861 1454 Pfam ABC transporter 1231 1375 IPR003439 GO:0005524
Phac10g01861 1454 Coils Coil 824 844 - -
Phac10g01861 1454 Pfam ABC transporter 621 755 IPR003439 GO:0005524
Phac10g01861 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1204 1443 IPR027417 -
Phac10g01861 1454 SUPERFAMILY ABC transporter transmembrane region 272 582 IPR036640 GO:0005524|GO:0016020
Phac10g01861 1454 CDD ABCC_MRP_domain2 1212 1428 - -
Phac10g01861 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1216 1444 IPR003439 GO:0005524
Phac10g01861 1454 CDD ABCC_MRP_domain1 603 803 - -
Phac10g01861 1454 Gene3D ABC transporter type 1, transmembrane domain 261 584 IPR036640 GO:0005524|GO:0016020
Phac10g01861 1454 Gene3D ABC transporter type 1, transmembrane domain 864 1195 IPR036640 GO:0005524|GO:0016020
Phac10g01861 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 902 1164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01861 1454 Gene3D - 1197 1444 IPR027417 -
Phac10g01861 1454 SMART AAA_5 630 803 IPR003593 GO:0016887
Phac10g01861 1454 SMART AAA_5 1240 1429 IPR003593 GO:0016887
Phac10g01861 1454 CDD ABC_6TM_ABCC_D1 285 576 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01861 Phac-Chr10 41069389 41075285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01861 590 847 Calmodulin-binding Proteins AT2G36910 26.855 3.31e-21 99.4