Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01856 ATGAATAATTTAAGTATTACAGTTGTGGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATCTTCAATGCCTCACCTTACTCACCTTTGCTTCCCTTCAAATGCTTATGTACAAATGGAAAGCCTGCTTATGTGACTATAAAGATAGACAACCAGAAGTTTGCAGAAACAAGTGAAGAAAGCAACCGTGTGTGGAACCAAACCTTTCAGATTCAATGTGCTCATCCAGCTGATTCATGCATCACCATTACACTGAAAACATCACGTTCTTCCATATTGGGGAAGTTCCATATTCAGGCTCAGCAGCTATTGAAGAAAGGAGGTTTGATCAACGGGTTATTCCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTCAAATTGAAGTTTATGCTATGGTTCAAGCCAGCAGATTTGGAACCAAGTTGGGCAAAGATGTTGAGCAATGACTGGGAATTTCAAGGGCTGAAGGAGGCTAGCTTCCCACTAAGGTCCAATTGTCAGGTTAAACTTTATCATGATGCTCACCATTCTTCAGCTTTTCAACCTCCCTTTGATCTATGTGGAGCTCCAAATAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTACTTAGTTTATATTGCAGGCTGGTTCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCACACAGAAATCCCACATGCCAGAGGAATTAAGTTAGGTGACCTACTAAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGATTATGCTTTGGGATGATGAAACATCTTTACCCTTTGTCAAGAACAAAGGTGAATTGAACAACCAAGATGAGGAAGCTTTTGCTTTTTTCAACCACACAAAAGTGATATGCAGAAAGTGTCCAAGATTGCACCATATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACAAAAGCACCCAAATCTGTTGATGACAGAGAGCTTATGAGCTTTGTGGGTGGGTTGGATCTGTGTGATGGAAGATATGACACAGAGCAGCATTCATTGTTTCAAACACTCATGAGGGAATCTCATTGCTATGACTTCTACCAAACAAGCATTGAAGAAGCTAGTCTCAACAAAGGAGGACCAAGAGCACCTTGGCATGATGCTCATGCCTGTGTTACTGGTGAGGCTGCTTGGGATGTGTTGACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAATCCCTTCTAGCACCTTGGCAAATCTTATGCCTAGGACAAGCTCTAGCACTCCTACAGAGAGGAATTGGAAAGTTCAAATATACAGGTCAATTGACCATATATCAGTTGGTGAGTTGTCTACAAAGTCAACTGTGGAGAGGAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCGTGCTGAAAGGTTTATATACATTGAAAGCCAATATTTCATTGGGGGATGCCATTGGTGGAAGAAAGATAGGCACTGTGGCTGCACTAATCTTATTCCCATTGAAATTGCACTGAAGGTGGTAAGTAAGATTAAGGCAAAGGAGAGATTTGCTGTGTACATAGTCATACCAATGTGGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACTAGAGAAACAATGGCAATGATGTATAGGTTGATTGGAGAAGCATTACAAGAAAGTAGAGAACCAGGACACCCTAGAGACTACTTGAATTTCTTCTGTCTTGCAAACAGAGAGCAGAAGGGACCAGGGGAGTATCTTCCTCTAGATTCACCCAAACCTGAAACACAATACTGGAATGCTCAAAAAAATAGGAGATTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGACCTATACATATTGATAGGATCAGCTAATGTAAACCAAAGATCGATGGATGGAGAAAGGGACACTGAGATTGCAATAGGATGCTACCAGTCTCAAGATGGAGATGATGATAACCACCAAATGAGCCTAGATGATATTCAAGCATATAGAATGTCTCTATGGTATGAGCACACAATGAGTGTTGATGAACTGTTGTTGGAGCCAGAGAGATTGGAATGCGTGGAGAGAATGAGATCAATAGGAGATGAAATGTGGGAAATGTACAGCAGTGAAGAAATTAGAGACATGGAAGGTGTGCACCTTGTGAGTTACCCTGTGAGAGTAACACCAGAAGGGTATGTGAAGGACCTCACTGATGGAGTTCATTTTCCTGATACAAATTCTCTTGTGAAAGGCAAAAGGTCCAAAATATTGCCCCCTATCTTCACCACTTAG 2313 0.4176 MNNLSITVVEETPKLLHGTIEATIFNASPYSPLLPFKCLCTNGKPAYVTIKIDNQKFAETSEESNRVWNQTFQIQCAHPADSCITITLKTSRSSILGKFHIQAQQLLKKGGLINGLFPLLMDNGKPNPKLKLKFMLWFKPADLEPSWAKMLSNDWEFQGLKEASFPLRSNCQVKLYHDAHHSSAFQPPFDLCGAPNKLWEDVYKAIEGAKYLVYIAGWFFNPMMVLVRDPHTEIPHARGIKLGDLLKKKAEEGVAVRIMLWDDETSLPFVKNKGELNNQDEEAFAFFNHTKVICRKCPRLHHMFPTLFAHHQKTITVDTKAPKSVDDRELMSFVGGLDLCDGRYDTEQHSLFQTLMRESHCYDFYQTSIEEASLNKGGPRAPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLIPSSTLANLMPRTSSSTPTERNWKVQIYRSIDHISVGELSTKSTVERSIHEAYVEAIRRAERFIYIESQYFIGGCHWWKKDRHCGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGEPESEPVQDILHWTRETMAMMYRLIGEALQESREPGHPRDYLNFFCLANREQKGPGEYLPLDSPKPETQYWNAQKNRRFMVYVHSKFMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQSQDGDDDNHQMSLDDIQAYRMSLWYEHTMSVDELLLEPERLECVERMRSIGDEMWEMYSSEEIRDMEGVHLVSYPVRVTPEGYVKDLTDGVHFPDTNSLVKGKRSKILPPIFTT* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01856 770 SUPERFAMILY Phospholipase D/nuclease 437 689 - -
Phac10g01856 770 SMART pld_4 306 343 IPR001736 GO:0003824
Phac10g01856 770 SMART pld_4 614 641 IPR001736 GO:0003824
Phac10g01856 770 Gene3D Endonuclease Chain A 185 437 - -
Phac10g01856 770 Pfam C2 domain 46 119 IPR000008 -
Phac10g01856 770 PIRSF PLD_plant 6 770 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phac10g01856 770 Pfam Phospholipase D C terminal 688 759 IPR024632 -
Phac10g01856 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 134 IPR035892 -
Phac10g01856 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 306 343 IPR001736 GO:0003824
Phac10g01856 770 SUPERFAMILY Phospholipase D/nuclease 165 416 - -
Phac10g01856 770 Gene3D C2 domain 34 139 IPR035892 -
Phac10g01856 770 PANTHER PHOSPHOLIPASE D 15 752 IPR015679 -
Phac10g01856 770 Gene3D Endonuclease Chain A 454 659 - -
Phac10g01856 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 614 641 IPR001736 GO:0003824
Phac10g01856 770 Pfam Phospholipase D Active site motif 617 641 IPR001736 GO:0003824
Phac10g01856 770 Pfam Phospholipase D Active site motif 307 343 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01856 Phac-Chr10 41029435 41033379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01856 34 770 Phospholipase D Gene Family (Wang group) AT1G55180 60.963 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01856 K01115 - gmx:100812642 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01856 10 41029435 41033379 Phac10g01856 10 41029435 41033379 ECH