Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01849 ATGCTCAAATCAAAATATAGAAGTAAACTTCCATTAGGGACTCTTGGATGGCCTTTTATAGGTGAAACCATTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCAGCATGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCCACGGATGCTGATGTGAATAAGTTTATACTGCAAAGTGATGCAAAAGTTTTTGTTCCTTCATATCCCAAGTCTCTTACTCAGTTGATGGGGGAGTCTTCTATTTTGCTTATCAATGGAAGCCTTCAGAGGAGAATACATGGACTTATTGGAGCTTTCTTCAAATCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCCAAGAATCAATGGCTAGTTGGAAAGAGGACTGCCCCATATACATACAAGACGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCATTGATTAGTTTGGATCCAGGAGAAGAAATGGATCTTCTGAAGAAACATTTTCAGGAATTTATCTCTGGCCTCATGTCTCTACCAATAAATCTACCAGGAACTAAACTTTATCAATCTTTGCAGGCAAAAAAGAAAATGGTGAAATTAGTGCGGAGAATTATCCTAGCTAAAAGAAATAGTGGCATTTGCAGAGTTCCAAAAGATGTGGTGGATGTGCTTCTTAATGATGCAAGTGAAAAATTGACCGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGGGAAGACTCAGTGCCAGTTCTCATGACTCTAGCTACAAAATATCTATCAGAATGTCCTGCTGCTTTGCAGCAATTGACGGAGGAAAATATGAAGCTTAAGAAACTTCAAGATCAGGTTGGAGAGTCCTTGTGTTGGAGCGATTACCTATCATTGCCATTTACTCAAACAGTCATCACTGAAACTCTCAGAATGGGAAATATTATAATTGGAGTAATGAGAAAGGCCTTAAGAGATGTTGAAATAAAAGGGAACTTTATACCACAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAGAACTATGAATGTCCATATCAATTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAGTTGCAATTTCAGTCCTTTTGGAGGGGGACAAAGGCTTTGCCCTGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACACCACTTTGTCACTCAATTCAGATGGCATGCTGAAGCAGATGCAATAGTGAACTTCCCCACAGTAAGAATGAAAAGGAGGATGCCTGTGATGGTAAGGAGAGTGGAATCTTAG 1344 0.3981 MLKSKYRSKLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRRSMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTQLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVQESMASWKEDCPIYIQDETKKIAFHVLVKALISLDPGEEMDLLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRRIILAKRNSGICRVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLKKLQDQVGESLCWSDYLSLPFTQTVITETLRMGNIIIGVMRKALRDVEIKGNFIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQDKDMSSCNFSPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWHAEADAIVNFPTVRMKRRMPVMVRRVES* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01849 447 PRINTS E-class P450 group I signature 354 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 PRINTS E-class P450 group I signature 396 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 PRINTS E-class P450 group I signature 314 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 PRINTS E-class P450 group I signature 386 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 PRINTS E-class P450 group I signature 43 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 389 398 IPR017972 GO:0005506|GO:0016705
Phac10g01849 447 Pfam Cytochrome P450 11 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 SUPERFAMILY Cytochrome P450 6 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 CDD CYP90-like 42 444 - -
Phac10g01849 447 Gene3D Cytochrome P450 2 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac10g01849 447 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 1 445 - -
Phac10g01849 447 PANTHER CYTOCHROME P450 26 9 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01849 Phac-Chr10 41015741 41020821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01849 9 418 Cytochrome P450 AT3G13730 68.675 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01849 K12638 - gmx:100797868 820.846