Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01839 ATGGATATTCATGCCCCGGCTCCTGCACCATCACCAGCTATTGTGCCGGGTCACCTTGATGTACCCTCTACTTCACCTACAATTTCTCCTCTAGGTTCATCATTGCAGAAGAAAAAGGCTCCACCTCCAGCATATGAATTGGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGCCAATGACTTGCTCAGAGCCCTTGACGTATACTCCTCCTGGGTCACCTTGTGGTTGTGTATGGCCACTTCAGGTTAAAATCCATATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTGCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTACTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCAGCTAGTCAGCAACTGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACCGCATTTTTAATATATAAGAAATTCTGGCGCCGGGAGATTCTGATAGATGCTTCAGTTTTTGGTGCTTATGAAGTACTCTATGTTCAGTATCCAGGTCTTCCACCATCCCCACCTTCAACTCCCTCAGATGCTTCTGTTATAGATGATGAGCCAAATCCAGGACATGACAACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAACAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGATTTGTGCACTGAAATGCTGTGCCTATGTTCATGAACACAAACCAGTTCCCGATGGTTTAATTTCATCTTCTTCAAAACAATCAAGGGCTGCAAGTTCATTGGCTTACGGGATAAGGGCAGGTTCTGGATTACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACATAGAAAAAGCAACAAATAACTTTGATTCTTCGAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACGAAGGAGTTCTAAATGATGGGAGGAATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACACCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGACCTGACAAGGAAACTGATCCACTGGATTGGAATGCGAGGATGAAGATTGCTCTTGGTGCAGCTCGGGGTTTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACACCGGGATTTCAAGGCTAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGATACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCCGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACGTGGGTTCGTCCACTTCTCACTAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCTAGCATTTCTGTTGATATTGTAGTTAAAGTTGCAGCGATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGGTTGAGGAAACAGACTATTTAAGATCAATGAGTTATCAAGAGGGTATTCTAACTGATGTGGAAGGAAAGTTTTCTGAAGCTTCAGGGGAAAGAGTGGAATTTTCGGAGTATCAAAAAGCTCTTTCTGGCTATCAGTCTGGTGAAGAAAAGGTAGAATTATCAGCATCAGAGCTTCTCAGTACTTCAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGATCAGGGCCTCTAACTATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGCGAAGTTTGTCAAGTGGTAGTACCAGTGAACATGGATTTTCAACTAAACTATGGTCCGGATCCCATTAA 2145 0.427 MDIHAPAPAPSPAIVPGHLDVPSTSPTISPLGSSLQKKKAPPPAYELVLPPPPPNKDCLPMTCSEPLTYTPPGSPCGCVWPLQVKIHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWRREILIDASVFGAYEVLYVQYPGLPPSPPSTPSDASVIDDEPNPGHDNNGMMMKPLGVDVPKKKQEGSNGRMIVIIVLSSVTAFVVFIGLAWICALKCCAYVHEHKPVPDGLISSSSKQSRAASSLAYGIRAGSGLQSFNSGTITYTGSAKIFTLNDIEKATNNFDSSRILGEGGFGLVYEGVLNDGRNIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSVESHLHGPDKETDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPSISVDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEETDYLRSMSYQEGILTDVEGKFSEASGERVEFSEYQKALSGYQSGEEKVELSASELLSTSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSSGSTSEHGFSTKLWSGSH* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01839 714 CDD STKc_IRAK 329 597 - -
Phac10g01839 714 MobiDBLite consensus disorder prediction 185 208 - -
Phac10g01839 714 FunFam receptor-like serine/threonine-protein kinase ALE2 296 398 - -
Phac10g01839 714 ProSiteProfiles Protein kinase domain profile. 323 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01839 714 Gene3D Transferase(Phosphotransferase) domain 1 399 617 - -
Phac10g01839 714 MobiDBLite consensus disorder prediction 26 46 - -
Phac10g01839 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Phac10g01839 714 PANTHER OS01G0750732 PROTEIN 50 614 - -
Phac10g01839 714 Pfam Protein tyrosine and serine/threonine kinase 326 596 IPR001245 GO:0004672|GO:0006468
Phac10g01839 714 SUPERFAMILY Protein kinase-like (PK-like) 303 596 IPR011009 -
Phac10g01839 714 Gene3D Phosphorylase Kinase; domain 1 296 398 - -
Phac10g01839 714 FunFam Receptor-like serine/threonine-protein kinase ALE2 399 614 - -
Phac10g01839 714 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01839 Phac-Chr10 40934568 40940987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01839 55 714 Receptor kinase-like Gene Family AT5G56890 60.178 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phac10g01839 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01839 - - gmx:100814040 1248.8