Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01834 ATGCAGCCGAAATCCCGTTTTTTTGTTCCTCCCCAAAAGGCCGTGAACAACAATAACAACTCCAACACTACCACCACCTCCTCCTCCTCCTCCACCACCAACAACAGAATCTCAACAACAAGAAATGGCAACAGCACCACCCAGGCTTGCGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCTGACTGCATTCTCGCACCTTACTTCCCTCACGATCGACAGCGCCAGTTTCTCAACGCTCACAAGCTCTTTGGTGTAAGCAACATCACCAAAATCATCAAGGTTGTCAGCCCTCACGACAAGGACCAAGCCGTCCGCACCATCATCTACCAATCTGACATGCGCGCCACAGACCCCGTTGGAGGCTGTTATAGGTATATTCTGGACCTTCAGGCTCAGATTGAGTACTGTCGAGCCGAGCTGGAACTGGTGCTTCAACAACTGGCCATGTTTCGAGCTCAGGCTCAGAATCAGCATCAGTATCAGCAGCAGCACGGGATGTATGCTCCGAACAATGTTAACGTGGCTGTGAATGGAGATGGTGAGGTTTTGAACGCTGATCCGATGGGGTTGTATAACCAGCAACAGTATCAGTGTCTGCAGCCGCACCAGCAGGAGCAGTATGTTATGATGCACGAAAATGGGAGCCAAAACTGCAACGGCGCCACTCCTTTGCAGGAACAGATCAACACGTGGGCTGTTCAGAACACTGCTGTGTCGCTTTCTTCCTTGTCGTTGCAAGGGCAGAGTAGTAATGTTAGTGATGAATATGATCACAAGCCCGTCATTGACATAGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAAGCAGTGCTGTTTAAGATAGATGATGCAGTAATAAAAGCTGAGGGTGACTGCATGCAACAAGCTCAAGACCATGACCTGAAAGGTGCAGCAACATCGTTTAGCCTCACAAACTGTACTTGCTGA 984 0.4929 MQPKSRFFVPPQKAVNNNNNSNTTTTSSSSSTTNNRISTTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVVSPHDKDQAVRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQNQHQYQQQHGMYAPNNVNVAVNGDGEVLNADPMGLYNQQQYQCLQPHQQEQYVMMHENGSQNCNGATPLQEQINTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKPVIDIDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEGDCMQQAQDHDLKGAATSFSLTNCTC* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01834 327 MobiDBLite consensus disorder prediction 11 44 - -
Phac10g01834 327 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Phac10g01834 327 MobiDBLite consensus disorder prediction 1 44 - -
Phac10g01834 327 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 202 - -
Phac10g01834 327 Pfam Lateral organ boundaries (LOB) domain 49 144 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01834 Phac-Chr10 40900113 40902226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01834 48 166 AS2 family AT3G13850 73.950 2.05e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac10g01834 LOB 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01834 - - vum:124830493 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02403 5 42423560 42425266 Phac10g01834 10 40900113 40902226 PCT