Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01821 ATGGGGCACCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGGCTTTGGTCTCCTGAAGAGGATGAAAAACTCATCAACTACATCACAACTTATGGACATGGTTGCTGGAGTTCTGTCCCAAAACTTGCAGGCCTTCAAAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTGAGACCTGATTTGAAACGTGGAAGTTTCTCTCCTCAAGAAGCAGCTCTCATTATTGAACTCCACAGCATTTTAGGGAACAGGTGGGCTCAGATAGCCAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATAAAGAAGAAACTCCTTTCTCATGATGCTATTCCTCCTTTAGCCACATTTTCTGATTTTCACAACCCCAGCAATATTGGTTCCATGGAAAGTTTCTTCCCTTTTACTGCAAACCCTAATGTCATCTTAAACTTTCACCATTACACAGACCAGCTCTACCTTCCCACTACACCATCCCCACTCCTACAAGCTTTTGATCACAGTAATGACATTAAGTTAGGCATCAACAATTACAATGCCAATTTCCTTGATATTCAGAATCCAGCACCAGAAACAACACTACCATCTTCCAATCCATCATCTTATGAAGACACATGGCCATTGGGTTGTGTAGCTCTACATCTCAATCCAAATGAAGAAAATCAAATCACCAAAAATGAAACCACCTCAGACTATGTTCTTGACAAATTCATCAACCCAACTGCATTGCAGCAACATGAATATCACTTGGTAGAACCCCTTGTGCCAAAAGTCAGTGAGAACATTGAGGATTATGTCTGCAGCATCCCGTTCTCATCTGCTCCCCAAGAACAACATGAAGCTACAGCAAAATTTCAGGGCTACCCACAAGATTTAACTGTGGCAGTCAACCAATTAGAGTACATTGATGCCTTCATGTCATTGTTGCCATCTTCAACAACTTCATCATCAGTATCAAGCACCCAAAAAGTCCCATACCCTATTATTCCTTCAGGATGGGAGCCTTGA 1041 0.4169 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDAIPPLATFSDFHNPSNIGSMESFFPFTANPNVILNFHHYTDQLYLPTTPSPLLQAFDHSNDIKLGINNYNANFLDIQNPAPETTLPSSNPSSYEDTWPLGCVALHLNPNEENQITKNETTSDYVLDKFINPTALQQHEYHLVEPLVPKVSENIEDYVCSIPFSSAPQEQHEATAKFQGYPQDLTVAVNQLEYIDAFMSLLPSSTTSSSVSSTQKVPYPIIPSGWEP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01821 346 PANTHER MYB DOMAIN PROTEIN 55 1 174 - -
Phac10g01821 346 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac10g01821 346 SMART sant 66 114 IPR001005 -
Phac10g01821 346 SMART sant 13 63 IPR001005 -
Phac10g01821 346 Gene3D - 69 116 - -
Phac10g01821 346 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac10g01821 346 FunFam Myb transcription factor 69 116 - -
Phac10g01821 346 CDD SANT 17 61 IPR001005 -
Phac10g01821 346 FunFam MYB transcription factor 6 66 - -
Phac10g01821 346 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac10g01821 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac10g01821 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac10g01821 346 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac10g01821 346 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Phac10g01821 346 Gene3D - 11 67 - -
Phac10g01821 346 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01821 Phac-Chr10 40817711 40819699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01821 1 118 MYB Transcription Factor Family AT3G13890 96.610 7.90e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac10g01821 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01821 K09422 - gmx:100785147 579.711