Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01819 ATGGGTGGTTCGGGAAGATGGCTTAAGTCTCTCATTTCTCTCAGAAAGCCCTCCACAACTGATCAAGACAAGGGTGGTGACAAGAGTAAGAGAAAGTGGAAATTATGGAGGGGCACTTCAGAAGGGTTTGGGATTGGATCATCCATGCAGAAGGGGCAGGGTGGTGGTGGGTCCTTTGTGCTGGATGATGGGGCCTTTGCTGCTGCTTTGGCTGCTGTTGTAAGAACTCCACTCAAAGACTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGAATCCAGGCAGTGTTTCGTGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGGAAGCAAGCAGCTGTTACTCTAAGATGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTGGGAAAAAATGTCAGTGAGCCCTGCAATGAAGCTGATCCTGTTAAGCAAGCTGAGCAAGGATGGTGTGACATTCCAGGAACTGCGGAAGCAGTTAAGGCAAAATTACAGATGAGGCAGGAAGGAGCAATTAAGAGGGATAGGACAAAGGCATACTCTCAGTCTAGACAGAAATCATCAGTGAGTGCTAGTCCAAACTCAAAAGCTGCTAAGCCAGTGCTTCCTCTCAAGCACCGCAGTCTAGACGGTAAGAGCTCAGGATGGGGCATGTTAGATCGCTGGATGTCTGCAAAACCATGGGAGAGCAGGTCGATGGTAGACACGTATTTGGACTCATCTGACATGACTCCAGTGACTAGTAAAAGTGATCATTTTGTTCTTCCCTTTAATTCTGATCAACAAAATGGCTCAGTCAAAACAAGAAAGAACGGTGTGACAACCAGGATTTCATCTAAATCACTTACAACTAGTCAGTCAACTCCATCATCTTCATCCATAAGCTCTGAATGCATGTATGATGATAGCCCTTTGTCAACTTCATGCACATCTGAATCACCACCTGTACCATCTACCAACAATGTTACGATGGAAGCAACAGAGGAAGGAAATGTTTGTAAACCAAGCTACATGAACCTGACAGCATCAACCAAAGCTAAACTGAAACCCTATAGGTGTTTTTCTCAGAATTCTAAGAGAATCTTTATGGATGATTGTGTGTCACTTAATGGAGTTACTAAAAGCAGTTCTGGTTCCTATCCTTCTGCTAATATGTGGAAGAATATCTATGCAACACCTTTAAGAACACGTTATCAAAAGCGATATACATTGGAAGATAAGTAG 1287 0.4499 MGGSGRWLKSLISLRKPSTTDQDKGGDKSKRKWKLWRGTSEGFGIGSSMQKGQGGGGSFVLDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGKNVSEPCNEADPVKQAEQGWCDIPGTAEAVKAKLQMRQEGAIKRDRTKAYSQSRQKSSVSASPNSKAAKPVLPLKHRSLDGKSSGWGMLDRWMSAKPWESRSMVDTYLDSSDMTPVTSKSDHFVLPFNSDQQNGSVKTRKNGVTTRISSKSLTTSQSTPSSSSISSECMYDDSPLSTSCTSESPPVPSTNNVTMEATEEGNVCKPSYMNLTASTKAKLKPYRCFSQNSKRIFMDDCVSLNGVTKSSSGSYPSANMWKNIYATPLRTRYQKRYTLEDK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01819 428 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Phac10g01819 428 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Phac10g01819 428 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Phac10g01819 428 MobiDBLite consensus disorder prediction 188 202 - -
Phac10g01819 428 SMART iq_5 85 107 IPR000048 GO:0005515
Phac10g01819 428 SMART iq_5 108 129 IPR000048 GO:0005515
Phac10g01819 428 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Phac10g01819 428 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Phac10g01819 428 MobiDBLite consensus disorder prediction 276 342 - -
Phac10g01819 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 128 IPR027417 -
Phac10g01819 428 Gene3D - 84 137 - -
Phac10g01819 428 MobiDBLite consensus disorder prediction 188 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01819 Phac-Chr10 40803397 40806496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01819 1 411 IQD Protein Family AT1G72670 43.619 3.03e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01819 - - vun:114166337 706.827