Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01805 ATGACACGGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCAATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCGTTGAGGAGGAACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGTACTGTGTATTGCAATCAGCCTCTTCTCCATGAAAAGAAGCCTCTATATTACTGCAGGAATGATATATCCACGACCAAGTACAATATTCTTACGTTTTTCCCCAAGGCACTCTTTGAACAATTCCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGTCTCTCGGCCTCTCCAATTTCACCTTTCAGCCCACTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTCAGTATGGCAAAGGAAGCATTGGAAGATTCTCGTAGGTTCCTTCAGGATGTCAAAATTAATCGCCGAAAGGTTAATCGTCATAAAAGCGATGGTAATTTTAGTCCAAGGTCGTGGCAGAACATTATGGTTGGGGATGTGCTAAAAGTGCAAAAGGATCAGTTTTTTCCAGCTGATTTGCTTCTTTTGTCATCGAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATCTTTGGAGTCTACCTTGGGTCTAGACAGTGACGAAGTTTTTAAAGATTTCACTGGAACAATACGTTGTGAAGACCCAAACCCGAATCTTTATACATTTGTTGGAAACTTAGAGTATGAGCGCCAGATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGATTACATATATGGGGTGGCCATTTTCACTGGTCATGATAGCAAAGTCATGCAAAATTCTACAAAGTCTCCTTCAAAACGAAGCACAATAGAAAAGAAGATGGATTATATCATATACACCCTCTTCACTGTCCTAATTTTGATATCTGTTATTAGTTCCATAGGATTTGTCATCAAGACTAAGTTCCAAACCCCAAATTGGTGGTATTTACGGCCGGACAATATTGAATACCAGTATGATCCCAAGAAAATTGGAGTAGCTGGAATGAGTCATCTGATTACTGCGCTTATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATCGAGGTTGTAAAGGTTTTACAGGCTACCTTCATCAACCAAGACATTCAAATGTATGATGACGATACTGGAACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCCTGTCAGATAAAACTGGAACTTTGACCTGCAATCAGATGGACTTTTTGAAGTGCTCTATTGCTGGTACCGCATATGGTGTGCGTTCCAGTGAAGTTGAAGTTGCTGCAGCAAAGCAGATGGCTTCTGATATTGAGGACCAGGATTCAGATCTCTCCAATTTCCCCCTGCCAAAGGCTAAAGTGCGAGTTTCATGGGATGATGTTAAAAAAGATGAAGAAATTGGACTGGAGGCTGTTGTTACTTCCAAAGTAGATGATGATCAAAGGCCTGCCATAAAGGGATTTGGTTTTGAAGATGACCGTCTCATGAACTGTAATTGGTTGAAAGAGGCCAATGCTGATGACCTTTTGATGTTCTTCCGAATCCTAGCAGTTTGCCACACTGCCATTCCTGAGCAGAATGAGGAGACCGGTGTTTATACATATGAAGCTGAGTCACCCGACGAAGGGTCTTTTCTTGTAGCAGCACGGGAATTTGGCTTTGAGTTTTGCAGAAGGACTCAGTCAAGTATTTTCGTACGTGAAAGGTTTTCTGCTTCTAGACAAGTGGTTGAAAGAGAGTACAAGCTTTTGAATCTGCTGGATTTTACCAGTAAAAGAAAACGAATGTCAGTGATCGTGCGTGATGAGGAGGGCATTATCTTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGCATGTCAAAGAATGGAAAAATGTATTTAGAGGCTACTACCAAACATCTAAATGATTACGGAGAAGCTGGTTTGAGGACACTAGCCCTGGCTTATAGAAAGCTTGATGAGGAAGAATATAAGGCTTGGAACAATGAATTTCAGAAAGCCAAAGCATCTGTTGGGGCTGAAAGAGATTCAATGCTTGAGCGAGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAATCTCGCTCAAGCTGGTCTTAAAATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGATTTTCTTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGGTTACAGATAATGTAACCACTGATGTCAATCAGTTCTTTTGTTTAACACCCCAGGCCATCAAGGATAACATCTCGAACCAACTCACCAATGCTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAAGATGATATGAAGCACCAATTTTTGGGATTGGCAGTTGATTGTGCATCCGTCATCTGTTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGATTAGTGAAACAAGGTACTGGGAAGACTACTCTAGCTATAGGTGATGGTGCAAATGATGTTGGGATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCAATTGCCCAATTTCGATTTCTAGAGAGGCTTCTGGTTGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGATATGTTATTTCTTCTACAAGAATATTGCATTTGGCCTCACCATCTTCTATTTTGAGGCTTTCACAGGCTTCTCTGGTCAATCAGTTTATGATGACTGGTATATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTTATTTCACTCGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAACAAGGACCCAGGAATTTATTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCCTCCCTCATCATCTTCTTTCTCGTCGTCACCATCTTCTACGACCAAGCATTTCGTAGTGATGGCCAGGTAGCCGACATGGCTGTTGTTGGGACCACTATGTTCACTTGCATCGTCTGGGCTGTCAACTGTCAGATTGCGTTGACAATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGAAGCATATCCACTTGGTACATCTTTCTCTTGTTGTATGGAATGCTTTCTCCAGAATATTCCAAGAGTGCCTACCAAATACTCGCTGAAGCTCTTGGTCCTGCTCCTAATTATTGGATAACAACCCTTTTAGTTACAGTTGCTTGCAATCTTCCTTATTTTGTCCACATATCCTACCAAAGATGTTTCCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGACATTGAAGACCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGACAGGAAACCAAGATTGGTTTCACCGCAAGAGTGGAAGCAAAGATCAGGCAACTCAAGGGAAGGCTGCAGAAGAAGCAATCTACCATGACTATTTCGGCCCCGGCCCCATCGTGA 3702 0.4214 MTRGRIRARLRRSNLYTFGCLKPSTVEEEPHPLQGPGFSRTVYCNQPLLHEKKPLYYCRNDISTTKYNILTFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKINRRKVNRHKSDGNFSPRSWQNIMVGDVLKVQKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLGLDSDEVFKDFTGTIRCEDPNPNLYTFVGNLEYERQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFVIKTKFQTPNWWYLRPDNIEYQYDPKKIGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDDTGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDIEDQDSDLSNFPLPKAKVRVSWDDVKKDEEIGLEAVVTSKVDDDQRPAIKGFGFEDDRLMNCNWLKEANADDLLMFFRILAVCHTAIPEQNEETGVYTYEAESPDEGSFLVAAREFGFEFCRRTQSSIFVRERFSASRQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGIIFLMCKGADSIIFDRMSKNGKMYLEATTKHLNDYGEAGLRTLALAYRKLDEEEYKAWNNEFQKAKASVGAERDSMLERVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTPVTDNVTTDVNQFFCLTPQAIKDNISNQLTNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRILGWMGNGLYSSLIIFFLVVTIFYDQAFRSDGQVADMAVVGTTMFTCIVWAVNCQIALTMSHFTWIQHLFVWGSISTWYIFLLLYGMLSPEYSKSAYQILAEALGPAPNYWITTLLVTVACNLPYFVHISYQRCFHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSTMTISAPAPS* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01805 1233 Gene3D - 592 699 IPR023299 GO:0000166
Phac10g01805 1233 NCBIfam HAD-IC family P-type ATPase 860 969 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac10g01805 1233 FunFam Phospholipid-transporting ATPase 724 928 - -
Phac10g01805 1233 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Phac10g01805 1233 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Phac10g01805 1233 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1190 - -
Phac10g01805 1233 CDD P-type_ATPase_APLT_Dnf-like 59 1048 - -
Phac10g01805 1233 FunFam Phospholipid-transporting ATPase 118 288 - -
Phac10g01805 1233 Gene3D - 112 288 - -
Phac10g01805 1233 Gene3D - 720 928 IPR023214 -
Phac10g01805 1233 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1164 IPR023298 -
Phac10g01805 1233 FunFam Phospholipid-transporting ATPase 591 722 - -
Phac10g01805 1233 SFLD C1.7: P-type atpase like 405 939 - -
Phac10g01805 1233 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Phac10g01805 1233 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Phac10g01805 1233 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Phac10g01805 1233 Gene3D - 419 431 IPR023214 -
Phac10g01805 1233 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Phac10g01805 1233 NCBIfam phospholipid-translocating P-type ATPase 57 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Phac10g01805 1233 Coils Coil 1204 1224 - -
Phac10g01805 1233 SFLD p-type atpase 405 939 IPR044492 -
Phac10g01805 1233 SUPERFAMILY HAD-like 410 932 IPR036412 -
Phac10g01805 1233 Pfam Cation transport ATPase (P-type) 546 651 - -
Phac10g01805 1233 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Phac10g01805 1233 Gene3D - 432 459 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01805 Phac-Chr10 40733080 40740508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01805 1 1226 Primary Pumps ATPases AT1G17500 74.980 0.0 1939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01805 K01530 - gmx:100784621 2295