Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01803 ATGGAAACTCGAGTTGGGAACAAGTTCCGTCTCGGTCGGAAAATTGGCAGCGGATCCTTCGGGGAGATCTATCTCGGAACTAATTTTCAGACGAATGAAGAGGTTGCGATTAAGCTTGAAAGTGTCAAAACCAAGCACCCTCAACTGTTGTATGAATCTAAGCTGTATAAAATACTGCAAGGAGGAAATGGGATTCCAAATGTGAAATGGTACGGTGTTGAAGGAGAGTACAATATCCTCGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTGTTCAACTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTGTTCATTCCAAATCATTTTTACATCGCGACATCAAGCCAGACAACTTTCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATATCATTGACTTTGGCCTTGCTAAGAAATATAGAGACACTACTACACATCAGCATATCCCTTACAGAGAGAACAAGAATTTGACAGGAACTGCTAGGTATGCTAGTATGAATACTCATCTAGGAATTGAGCAAAGCCGGAGGGATGATTTAGAGTCACTTGGATATGTTCTTATGTACTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTACGAGAAGATTAGTGAGAAGAAAGTTACTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAGTTTGCTTCTTACTTCCATTACTGCCGATCACTGAGGTTTGATGACAAACCAGATTATGCTTATTTGAAAAGACTTCTGCGTGACCTTTTCATTCGTGAAGGGTTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAAGTGCCACTGCCCCTGCCCGTGCCATTGGTCCTCCTGCTGCTGGACCAAGTTCAGGCGTGCCACCACTGGCTGCAAATGCTGATGGACAGTTAGGTGGAGAGGATGGTAGGCATAATAATTGGTCTTCATCAGATCCTACTCGTAGGAGAAACCCTGTACCTTTTGCTAATGATGGAGTGTTATCGAGGCAAAAGAGCCCAGTTACATATGACTCGACTCTATCTAAAGATGTTACGTTGTCAAGTTCTAATTTTTTCCGGCCAATTGGATCTGCAAGGCGAGGTGGTGTCTCAGGAAGCCGAGAATCCCGTGATGTGGTTGTTGGCAGTGAGAGTGAGGTTTCTCGTCCTCTGACTCTGGATTCAAGTCAGGGAGCACTTCGTAAAATGTCTGTTCCTGGTGCTCAGAGAAGTTCAGCGATTACGTCATCTGAGCAGAACCGTACATCCTCTGGCAGAAACACATCGAACATAAAGAATTTGGAGACAACTCTTAGGGGTATTGAGAGCCTACATTTCAATGAAGAGAGGGTACATTATTAG 1440 0.4319 METRVGNKFRLGRKIGSGSFGEIYLGTNFQTNEEVAIKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNILVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVTTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQSATAPARAIGPPAAGPSSGVPPLAANADGQLGGEDGRHNNWSSSDPTRRRNPVPFANDGVLSRQKSPVTYDSTLSKDVTLSSSNFFRPIGSARRGGVSGSRESRDVVVGSESEVSRPLTLDSSQGALRKMSVPGAQRSSAITSSEQNRTSSGRNTSNIKNLETTLRGIESLHFNEERVHY* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01803 479 MobiDBLite consensus disorder prediction 304 367 - -
Phac10g01803 479 FunFam Putative Casein kinase I 1 85 - -
Phac10g01803 479 CDD STKc_CK1_delta_epsilon 8 282 - -
Phac10g01803 479 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phac10g01803 479 MobiDBLite consensus disorder prediction 335 349 - -
Phac10g01803 479 FunFam Casein kinase I isoform delta-like 1 308 - -
Phac10g01803 479 PANTHER CASEIN KINASE-RELATED 8 421 - -
Phac10g01803 479 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phac10g01803 479 MobiDBLite consensus disorder prediction 430 457 - -
Phac10g01803 479 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01803 479 MobiDBLite consensus disorder prediction 434 457 - -
Phac10g01803 479 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Phac10g01803 479 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01803 479 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01803 479 MobiDBLite consensus disorder prediction 385 416 - -
Phac10g01803 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01803 Phac-Chr10 40726773 40731385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01803 11 212 Receptor kinase-like Gene Family AT1G67720 28.095 2.04e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phac10g01803 Pkinase 9.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01803 K02218 - gmx:100787808 821.231