Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01775 ATGCCGACGGGTGCCCCCAATTTCCCGGCAAGCTTCAAACTTTCCGTCGCCGGCTCCGATTTCGATGTCTTTCCGTTAGGGTTGGATGGTGTTGTGAAGGAAAGAGCAGATTTTGAATCTGGGTTTTTGTTGGATGGTGGGGAATATGGATATAACAAGCGGTCTCTTATTGCGAAATTGGCTGCAATTTCAAGCTTGGTAGTGAAAGTGGGGGAAATGAGCATTAGAATGGCAGAGGGAGAATCTAGTGAGGAGGTTCATGTTCCGGGTGAGATTGATTGGCAAATGCTCGATAAATCCAAGTTCTTTTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCTCAGTCCCAAGTATCTTGCATCAGCACTGCATTTTCATTGATTAAGGGTGAGGGTTTTAGAGCATTGTACCGTGGGTTTGGGACTTCTCTGATGGGTACAATCCCTGCTAGGGCTCTGTACATGGCTGCATTAGAGGTTACCAAAAGCAATGTGGGCACGGCCACAGTTAGGTTTGGTCTTGCTGAACCCACTGCTTCTGCAGTTGCCAATGCAGCTGCTGGCTTGAGTGCAGCCATGGCAGCACAGCTTGTGTGGACCCCTGTTGATGTTGTGAGCCAGAGATTGATGGTTCAGGGTTGTTGTGATTCTGGCAGTCCTAAGGCTTCCGCATATCGGTACATCAATGGGATTGATGCCTTCAGGAAGATACTGAGCAATGATGGTCTTAGGGGCTTGTATAGGGGTTTTGGGATCTCAATTTTGACCTATGCCCCTTCAAACGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTCTGGGGTGGAGTTGGGTACTACTTGTACAAGGGCAATGATAATGCAGCTAACAGTGCTTTGAGGCCTGATACAAAAACTATGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGATACCATCAAGACAAGACTGCAGGTCTTGGATGGCGACGAGAACGGCCGTCGTGGACCCACCATTATGCAGACAGTGAGGAGTCTGGTCAGGGAAGGTGGTTGGATGGCTTGTTACAGAGGATTGGGGCCTAGGTGGGCATCGATGTCAATGTCTGCAACAACAATGATCACTACTTATGAGTTCCTCAAACGGCTCTCCGCAAAGAACCAAGAGGTTTTAACATGA 1248 0.488 MPTGAPNFPASFKLSVAGSDFDVFPLGLDGVVKERADFESGFLLDGGEYGYNKRSLIAKLAAISSLVVKVGEMSIRMAEGESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCISTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRFGLAEPTASAVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGCCDSGSPKASAYRYINGIDAFRKILSNDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLYKGNDNAANSALRPDTKTMMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTIMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01775 415 Pfam Mitochondrial carrier protein 321 410 IPR018108 -
Phac10g01775 415 Pfam Mitochondrial carrier protein 109 180 IPR018108 -
Phac10g01775 415 Pfam Mitochondrial carrier protein 195 291 IPR018108 -
Phac10g01775 415 Gene3D Mitochondrial carrier domain 102 413 IPR023395 -
Phac10g01775 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 98 180 IPR018108 -
Phac10g01775 415 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 81 412 - -
Phac10g01775 415 SUPERFAMILY Mitochondrial carrier 95 403 IPR023395 -
Phac10g01775 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 406 IPR018108 -
Phac10g01775 415 PRINTS Mitochondrial carrier protein signature 155 175 IPR002067 GO:0055085
Phac10g01775 415 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Phac10g01775 415 PRINTS Mitochondrial carrier protein signature 103 116 IPR002067 GO:0055085
Phac10g01775 415 PRINTS Mitochondrial carrier protein signature 326 348 IPR002067 GO:0055085
Phac10g01775 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 290 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01775 Phac-Chr10 40383309 40384930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01775 73 412 Chloroplast and Mitochondria Gene Families AT1G72820 73.623 1.26e-180 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01775 K15121 - gmx:100784616 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01775 10 40383309 40384930 Phac10g01775 10 40383309 40384930 ECH