Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01773 ATGGACTCGCGCACGTATAATCCACGCACTGTCGAAGAGGTTTTTAGGGATTTCAAGGGCCGGAGAGCTGCTCTCATCAAAGCCCTTACCACTGATGTTGAAGATTTCTACAACCAATGTGATCCTGAGAAGGAGAATCTCTGCTTGTATGGCTTTCCCAGTGAACAGTGGGAAGTAAATTTACCTGCTGAAGAAGTTCCACCTGAGCTTCCTGAGCCTGTGCTGGGCATTAACTTTGCTAGGGATGGCATGCAAGAAAAAGACTGGCTATCTTTAGTTGCTGTCCATAGTGATGCATGGTTACTTGCTATAGCATTCTATTTTGGAGCAAGATTCGGGTTTGATAAAGCTGACAGGAAACGGCTTTTCAACATGATCAATGAACTGCCAACAATATTTGAAGTTGTTACTGGTGCAGCAAAGAAGCAAGTTAAGGAGAAACCTTCTGTCTCAAACCACAGTGGCAGCAAGTCGAAGTCCAGCTCTAAGGCACAACGGGCTCCGGAATCTCAGAGTAGACAGTCAAAGCCATTGCAACAACCAAAAGAAGAGGATGAAGATCTGGACGAACAAGATGAAGATGAACATGGAGAGACCTTGTGTGGGGCATGTGGTGAGCATTATGGCACTGATGAATTCTGGATTTGCTGTGACATCTGTGAGAAATGGTTCCATGGTAAATGTGTGAAGATTACCCCAGCTAGGGCAGAGCATATCAAGCAATACAAGTGTCCATCATGCAGTAACAAGAGAGCTCGCCCCTGA 765 0.4549 MDSRTYNPRTVEEVFRDFKGRRAALIKALTTDVEDFYNQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINELPTIFEVVTGAAKKQVKEKPSVSNHSGSKSKSSSKAQRAPESQSRQSKPLQQPKEEDEDLDEQDEDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01773 254 MobiDBLite consensus disorder prediction 149 177 - -
Phac10g01773 254 Pfam Alfin 10 138 IPR021998 GO:0006355|GO:0042393
Phac10g01773 254 SMART PHD_3 200 248 IPR001965 -
Phac10g01773 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 249 IPR013083 -
Phac10g01773 254 SUPERFAMILY FYVE/PHD zinc finger 190 251 IPR011011 -
Phac10g01773 254 ProSitePatterns Zinc finger PHD-type signature. 201 247 IPR019786 -
Phac10g01773 254 PANTHER CPG BINDING PROTEIN 7 253 IPR045104 GO:0006355|GO:0042393
Phac10g01773 254 CDD PHD_AL_plant 200 250 IPR044104 -
Phac10g01773 254 ProSiteProfiles Zinc finger PHD-type profile. 198 250 IPR019787 -
Phac10g01773 254 MobiDBLite consensus disorder prediction 144 193 - -
Phac10g01773 254 Pfam PHD-finger 201 250 IPR019787 -
Phac10g01773 254 FunFam PHD finger alfin-like protein 193 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01773 Phac-Chr10 40371104 40375435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01773 6 253 Alfin-like Transcription Factor Family AT3G42790 76.613 4.61e-126 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Phac10g01773 Alfin 8.5e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01773 K26274 - gmx:100170700 488.804