Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01750 ATGACATATTCTTATTCTTTCCGAGTTTTTGATAAAATCAAACGTGTTGTATTTGTTTGTCTCTTGCTGGCAGCGTTAGACAATAATAATAACTCTTCATATCCAGTGACAGATTTTGCTTATCCCAATGACTCCCCTCAGATAAAGTACGATGTGTTTGTTAGCTTTAGAGGCACAGATATCAGGCAAGATTTCCTTAGCCATTTGATTGAGGCGTTTTCTCGAATGCATATTAATGCGTTCGTAGATAACAAGATTGTTAAAGGAGATGGACTGTCTGAAGCACTTGTTCATGCAATTGAAGGATCACCAATTTCATTGATTATATTTTCACAAGACTACGCTTCTTCACATTGGTGTTTGTCAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAAAAATGGCCAGATTGTACTACCTATCTTCTACAAAGTGGATCCTTCACATGTACGGTATCAGAAGGGGACTTATGAAGATGCCTTCGCTAAACATGAAATAAGATATAGTTTGACCACTACACAGACCTGGAGATCTGCTTTGACTGAATCTGCTAATATATCAGGATTTCATTCATCAACTTTTCGGGACGAAGCTGAGTTTATCAAAGAGATAGTTAAATGTGTGTTGATGAGGTTGAATCAAGTGCAACAAGTTAACTCAAAAGGGCTTGTTGGAGTTGGTAAACGAATTGCACATGTTGAATCATTGCTACAATCAGAAGGGCCTGATGTACGCATTATTGGAATATGGGGCATGGGTGGTATTGGTAAAACAACCATTGCACAAGAAGCATATAATAAATTGTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGAGAAGAATCGGGAAGACTTGGAATGATCTCTTTGAAGAAGAAGCTTTTCTCAACATTATTAGGAGGAGAAGATTTGAAAATTGACACACCCAATGGATTGCCTCAATATATTGAGAGAAGGCTTCGTCGTATGAAAGTTCTCATCATTCTTGATGATGTCAATGATTCAGATCAACTGGAAATTTTAGCTGGAACATATGATTGGTTTGGATCAGGTAGCAGAATCATCATAACAACCAGAGATAAGCAGGTACTAGCTAAAGAGTTTGCTAATATATATGAGGTTGAGGCATTAAACTTGGATGAATCCTTAAGGCTTTTCAATTTGAATGCCTTTAAGCAAAACCATCTTGAAAGTGAGTACCATGAGCTTTCAAAGAAAGTGGTCAATTATGCCAAAGGAATTCCACTAGTTCTTAAAGTTTTGGGTCACCTCCTTCATGGAAAAGATAAAGAAACTTGGGAAAGCCAATTAGAAAGACTCAAAAAAGTGCAAAACAGAAAGGTCCATGATATTATTAAATTGAGTTACAATGATCTTGATCAGGATGAAAAGAAGATATTTTTAGATATTGCATGCTTTTTCGATGGACTGAATCTGAAAGTAAAGCATATAAATTTTTTATTGAAAGACCATGATTATTCAGTGATTGCCGGATTAGAAAGGTTGAAAGATAAAGCTCTTATCAGTGTTTCTCAAGAAAATGGTGTATCGATGCACAACATTATACAAGAAACAGCTTGGCAGATTGCTCGAGAAGAATCAATTGAAGATCCTAGAAGTCAAGTTCGACTGTTGGATCCTGAGGACGTTTATCACGTACTAAACTATGATAAGGGTGACGAGGCTATCAGAAGCATAGTCATCAACTTGTCAAAAATCAAAGAACTGCAATTAAACCCTCAAGTATTTGCAAGGATGAGCAAACTACATTTTCTAGATTTTTATAGTAAAGGGTCTTGTAGTTCCCTCTGGGATCAAGGAGGCTTGTATCTTCCCCAAGGGCTTGAATCTTTATCAAATGAACTAAGATATCTTCGTTGGACCCATTATCCGTTGGAATATTTGCCTTCAAAGTTTTCTGCTGAAAATCTTGTTGAATTGAACTTGCCATATAGCAGACTGAAAAAACTTTGGCAAGAAGCACCTGATCTTGTTAACTTAAGGGTCCTTATACTTCATTCATCAACAAGACTAAAGGAGCTACCAAACCTTTCAAAGGCCACAAATCTTAGAGTGATAGATCTCCGATTTTGTGTAGGGCTGACTAGTGTGCATTCATCAGTATTCTCTCTTAGAAATCTTGAGAAATTGGATCTAGGTGGCTGCATTTCCCTTAGAAGCCTTCGAAGCAATGTCCATTTGGACTCCCTTCGTTATCTCTCCCTCTATGGATGCATGACACTAAAGGATTTCTCAGTGACCTCAAAGAATATGGTAAAGTTGAATTTAGAACTCACTAGTATCAAGCAACTACCTTCATCATTTGGACTTCAAAGCAACCTCCAAAAGCTACGTTTGGCATACACTTACATTGACCACTTGCCAACAAGTATGAAGCATCTTACAAGGCTGCGACATCTAGATCTAAGACATTGCAAAAAGCTTCGAACTCTACCAGAGCTCCCCCCATCACTTGAAACACTAGATGCCCGTGGATGTGTGTCACTTGAGACTGTAATGTTCCCTTCTACTGCTTGTGAACAACTGAAGGAAAATAAGAAAAGAGTTGCTTTCTGGAACTGCTTGAAATTGGATGAACATTCTCTCACGGCTATTGAGTTGAATGCACAAATTAACATGATGAAATTTGCACACCAACATTTTTCCCGACTTGGTGATGCTCAAAGTACCTATGTGTATCCTGGAAGTAAAGTTCCAGAATGGCTAATGCATAAGACAACACATGATGACTACGTGATTATTGATCTCTCTTCTGTTCTTTCTCATAACTCCTCACGCGTAGGCTTCATTTTTGGCTTTGTTGTTCCGGAAGTCCCATTTGGGGGTTTGGTTCTGGAATTTAAGATTAGTACTGGTGGTGAAAGTGATGAAGGTGGTGAAGCTAGCCATATCAATGTGTACATGGACAGACCACGTCATGGTATTAGATCAGATCATGTGTATCTAATGTATGACCAGGCATGTTCTCGCTACCTAAACAGTCGTGCCAAACATGAGCCAAGGTTGAAAATTAAGGTTGCATTGGCATCGCGAACGCTCACATCTAAGTACGTTCCATTACAGCTAAAAGCTTTTGGAATCAGCATGATCAATACTTCAAACTTTCACAATTTTGTTCAAAAAGTAAAATTTGGTGATAGTATACCAAATGTCCCAATTCTATTAAGATTTTTCTGTACTTTCTGCATTCTTGTTTTGGTTGGGACTTTTAATATTTATGTCAGAAGATTGGTGTAA 3267 0.3765 MTYSYSFRVFDKIKRVVFVCLLLAALDNNNNSSYPVTDFAYPNDSPQIKYDVFVSFRGTDIRQDFLSHLIEAFSRMHINAFVDNKIVKGDGLSEALVHAIEGSPISLIIFSQDYASSHWCLSELVKIVECRKKNGQIVLPIFYKVDPSHVRYQKGTYEDAFAKHEIRYSLTTTQTWRSALTESANISGFHSSTFRDEAEFIKEIVKCVLMRLNQVQQVNSKGLVGVGKRIAHVESLLQSEGPDVRIIGIWGMGGIGKTTIAQEAYNKLCFEYEGCCFLANIREESGRLGMISLKKKLFSTLLGGEDLKIDTPNGLPQYIERRLRRMKVLIILDDVNDSDQLEILAGTYDWFGSGSRIIITTRDKQVLAKEFANIYEVEALNLDESLRLFNLNAFKQNHLESEYHELSKKVVNYAKGIPLVLKVLGHLLHGKDKETWESQLERLKKVQNRKVHDIIKLSYNDLDQDEKKIFLDIACFFDGLNLKVKHINFLLKDHDYSVIAGLERLKDKALISVSQENGVSMHNIIQETAWQIAREESIEDPRSQVRLLDPEDVYHVLNYDKGDEAIRSIVINLSKIKELQLNPQVFARMSKLHFLDFYSKGSCSSLWDQGGLYLPQGLESLSNELRYLRWTHYPLEYLPSKFSAENLVELNLPYSRLKKLWQEAPDLVNLRVLILHSSTRLKELPNLSKATNLRVIDLRFCVGLTSVHSSVFSLRNLEKLDLGGCISLRSLRSNVHLDSLRYLSLYGCMTLKDFSVTSKNMVKLNLELTSIKQLPSSFGLQSNLQKLRLAYTYIDHLPTSMKHLTRLRHLDLRHCKKLRTLPELPPSLETLDARGCVSLETVMFPSTACEQLKENKKRVAFWNCLKLDEHSLTAIELNAQINMMKFAHQHFSRLGDAQSTYVYPGSKVPEWLMHKTTHDDYVIIDLSSVLSHNSSRVGFIFGFVVPEVPFGGLVLEFKISTGGESDEGGEASHINVYMDRPRHGIRSDHVYLMYDQACSRYLNSRAKHEPRLKIKVALASRTLTSKYVPLQLKAFGISMINTSNFHNFVQKVKFGDSIPNVPILLRFFCTFCILVLVGTFNIYVRRLV* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01750 1088 SUPERFAMILY L domain-like 570 853 - -
Phac10g01750 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 473 IPR027417 -
Phac10g01750 1088 Pfam Leucine Rich Repeat 646 663 IPR011713 -
Phac10g01750 1088 Gene3D - 210 374 IPR027417 -
Phac10g01750 1088 Gene3D - 47 209 IPR035897 -
Phac10g01750 1088 SUPERFAMILY "Winged helix" DNA-binding domain 450 557 IPR036390 -
Phac10g01750 1088 Pfam NB-ARC domain 234 460 IPR002182 GO:0043531
Phac10g01750 1088 Pfam TIR domain 49 220 IPR000157 GO:0007165
Phac10g01750 1088 ProSiteProfiles TIR domain profile. 48 212 IPR000157 GO:0007165
Phac10g01750 1088 FunFam Disease resistance protein (TIR-NBS-LRR class) 46 214 - -
Phac10g01750 1088 Gene3D - 379 463 IPR042197 -
Phac10g01750 1088 Gene3D Ribonuclease Inhibitor 562 758 IPR032675 -
Phac10g01750 1088 PRINTS Disease resistance protein signature 322 336 - -
Phac10g01750 1088 PRINTS Disease resistance protein signature 802 818 - -
Phac10g01750 1088 PRINTS Disease resistance protein signature 414 428 - -
Phac10g01750 1088 PRINTS Disease resistance protein signature 246 261 - -
Phac10g01750 1088 SMART till_3 49 186 IPR000157 GO:0007165
Phac10g01750 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 44 189 IPR035897 -
Phac10g01750 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 755 IPR044974 GO:0006952
Phac10g01750 1088 Gene3D Ribonuclease Inhibitor 759 929 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01750 Phac-Chr10 40188930 40193663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01750 41 823 WRKY Transcription Factor Family AT4G12020 34.131 2.76e-113 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01750 - - gmx:100802823 1747.64