Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01747 ATGCCTATTTTCTACGAAGTAGATCCTTCAGAGGTACGGCATCAAAGGAGGACTTATGGAGATGCCTTTGTTAAACATGAAAGAAAGTATTCCTTGACTACTGTGCAAAGCTGGCGATCTGCTTTGACTGAATCTGCTAATCTATCAGGATTTCATTCATCAATTTTTCAAGATGATGCTGAACTTGTTAAAAAGACAGTTAAATTTGTGTGGAGGACGTTGAATCATGTTCACCAAGTTAACTCCAAAGGGCTTGTTGGAATTGGTAAACGAATTGCCCATGTTGAATCATTGCTGCAATTAGAAGCAACAGATGTTCGCATGATTGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACTATTGCACAAGAAGTATATAATAAACTGTGTTTTGAATATGATAGTTGTTGTTTTCTGGCTAACATAAGGGAAGAGTCAGGAAGACATGGAATAATCTCTTTGAAGAAAAAGCTTTTTTCAACATTATTAGGAGAAGAACATTTGAAAATTGACATATCAAATGGGTGGCAGAAGTTAGTTGAGAGAAGACTTCATCGCTTGAAGGTTCTTATTATTCTCGATGATGTCGATGACTCAGAGCAACTAGAAATCTTAGCTAGAACAGCTTGGTTTGGATCTGGTAGTAGAATCATTGTGACAACCAGAGATAAACAGGTTCTTGCTAAAGAGTTTGCTAATGTATACCAAGTTGAGGCCTTAAACTTTGATGAATCTTTGCGACTTTTCAATCTAAATGCCTTTAAGCAAAAACATCTACAAGCAGAGTACCAGGAACTGTCAAAGAAAGTGGTTGATTATGCCAAAGGCATTCCCTTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGGAAAGATAAAGAGATATGGGAAAGTCAATTAGAAGGACAAATGCACAACAAAAAGGTTCATGATATTATTAAATTGAGTTACAATGATCTTGAGGTGGATGAAAAGAGGATTTTTTTGGATATTGCATGTTTTTTTTATGGGCTGCAACTGGAGGTAAAGTACATAGATTTTTTATTGAAAGATCGTGATTATTCAGTGGCTGCGGGATTGGAAAGGTTGAAGGATAAAGCTCTTATCAGCATTTCTCAAGAAAATACTGTATCAATGCATGACATTATACAAGAAACTGCTAGGCAGATTGCTGGCCAAGAATCTATTGAAGACCCCAGAAGTCAGAGGCGACTATTTGATCCTGATGGCATTTATGAAGTACTAACACACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCATCAACTTGCTGAGAATGAAGCAACTACATTTAAAGCCAGAAGTATTTACTAAGATGAGGAAGCTCCACTTTCTAAATTTATACACTGCAGGAACTCGTGATATTCTCCTCTGTGAACCGTGGGGCTTGTATCTTCCTCAAGGGCTTGAATCTCTGCCAAATGAGCTAAGATATCTTGGTTGGACGAATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCTGCAGAAAATCTAGTAGAGTTGCATTTGCCATATAGCCGGGTGAAAAAACTATGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTATCCTGCATTCATCCTCAAACATAAAGGAGCTGCTAGACTTTTCAAAGGCCCCAAACCTTGAAGTAATAGATCTTCGATTCTGTGTAGGGTTGACCAGTGTTCATCCATCAATTTTCTCTCTCAAAAATCTTGAGAAGTTAGATTTGGATGGATGCACGTCCCTCACAAGCCTTCGAAGCAATATCCATTTGGACTCTCTTCGTTATCTCTCCCTCTACAGCTGCATGGAACTAAAGGATTTCTCAGTGACCTCAGAGAATATGATAAGGTTGAATTTAGAACGCACCAGTATCAGGCAACTCCCTTCATCTATTGGATCTCAAAGCAAGCTTGAAAAGTTAAACCTTGCATTCACTTACATTGAGAGCTTGCCTGAAAGCATAAAAAATCTTAAAGGGTTGCGACATCTGGATCTACGATACTGTGAGAAGCTTAGGTCCCTACCAAAGCTTCCTCCATCAATTGAAACACTAGATGTCCGTGAATGCGTATCACTGGAGAGTGTAACTTTCCCTTCTATTGCTGAACAATGGAAGGAAAATAAGAAAAAGGTTGTCTTTTGGAACTGCTTTAAATTGGATGAGCATTCTCTCACGGCTATTGAGACGAATGCTAAAATCAACATGGTGAAATTTGCACACCAGCATTTGTCTACATCTGGTGATGCTCAAGGTATTTATGTGTACCCAGGAAGCCAAGTTCCAGAATGGTTGATCCATAAGGCCACACATGATGATTACATAACTATTGCTCCACATTCTTCTCACTTGGGCTACATCTTTTGCTTCATTTTACCGGAAGTGCCGTATGGGGAAAGGGTCTTGAAATTGAAGATTAGTACTGAAGGTGAAGATGAAGGTGAAGATGAAGGTGAAGGTGAAGATGACAGTATGATTGTGTACTTGGATAGACCACATCATGGGATTAAGTTGGATCACGTGTATCTGATGTACAACCAAGCATGTTCTCGCTTTCTACAAAGTCGTGCCAAACATCAAGCAATGTTGAAAATTAAGGTTACAGTAGCATCACTAGCACTCTCATCCGAATACATACAGGTGCAGTTAAGAGGGTTTGGGGTCAGCACAATCAGCAATTTTCTTCAGAAACAAAAATTGGGTGATGCTCGAATTCCAAAGGAAGTTTATGAAGTCTACCCTGTTTCTGTGTGGAACAGGTGA 2781 0.3916 MPIFYEVDPSEVRHQRRTYGDAFVKHERKYSLTTVQSWRSALTESANLSGFHSSIFQDDAELVKKTVKFVWRTLNHVHQVNSKGLVGIGKRIAHVESLLQLEATDVRMIGIWGMGGIGKTTIAQEVYNKLCFEYDSCCFLANIREESGRHGIISLKKKLFSTLLGEEHLKIDISNGWQKLVERRLHRLKVLIILDDVDDSEQLEILARTAWFGSGSRIIVTTRDKQVLAKEFANVYQVEALNFDESLRLFNLNAFKQKHLQAEYQELSKKVVDYAKGIPFVLKLLGHRLHGKDKEIWESQLEGQMHNKKVHDIIKLSYNDLEVDEKRIFLDIACFFYGLQLEVKYIDFLLKDRDYSVAAGLERLKDKALISISQENTVSMHDIIQETARQIAGQESIEDPRSQRRLFDPDGIYEVLTHNKGNEAIRSIVINLLRMKQLHLKPEVFTKMRKLHFLNLYTAGTRDILLCEPWGLYLPQGLESLPNELRYLGWTNYPLESLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNLKVLILHSSSNIKELLDFSKAPNLEVIDLRFCVGLTSVHPSIFSLKNLEKLDLDGCTSLTSLRSNIHLDSLRYLSLYSCMELKDFSVTSENMIRLNLERTSIRQLPSSIGSQSKLEKLNLAFTYIESLPESIKNLKGLRHLDLRYCEKLRSLPKLPPSIETLDVRECVSLESVTFPSIAEQWKENKKKVVFWNCFKLDEHSLTAIETNAKINMVKFAHQHLSTSGDAQGIYVYPGSQVPEWLIHKATHDDYITIAPHSSHLGYIFCFILPEVPYGERVLKLKISTEGEDEGEDEGEGEDDSMIVYLDRPHHGIKLDHVYLMYNQACSRFLQSRAKHQAMLKIKVTVASLALSSEYIQVQLRGFGVSTISNFLQKQKLGDARIPKEVYEVYPVSVWNR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01747 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 699 IPR044974 GO:0006952
Phac10g01747 926 Pfam NB-ARC domain 98 311 IPR002182 GO:0043531
Phac10g01747 926 PRINTS Disease resistance protein signature 275 289 - -
Phac10g01747 926 PRINTS Disease resistance protein signature 572 588 - -
Phac10g01747 926 PRINTS Disease resistance protein signature 108 123 - -
Phac10g01747 926 PRINTS Disease resistance protein signature 184 198 - -
Phac10g01747 926 Gene3D Ribonuclease Inhibitor 618 752 IPR032675 -
Phac10g01747 926 SUPERFAMILY "Winged helix" DNA-binding domain 308 416 IPR036390 -
Phac10g01747 926 Gene3D - 79 237 IPR027417 -
Phac10g01747 926 ProSiteProfiles TIR domain profile. 1 74 IPR000157 GO:0007165
Phac10g01747 926 Gene3D Ribonuclease Inhibitor 415 617 IPR032675 -
Phac10g01747 926 Pfam Leucine Rich Repeat 506 524 IPR011713 -
Phac10g01747 926 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 51 IPR035897 -
Phac10g01747 926 Gene3D - 1 78 IPR035897 -
Phac10g01747 926 Gene3D - 240 322 IPR042197 -
Phac10g01747 926 Pfam TIR domain 1 86 IPR000157 GO:0007165
Phac10g01747 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 332 IPR027417 -
Phac10g01747 926 SUPERFAMILY L domain-like 429 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01747 Phac-Chr10 40184655 40188408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01747 2 682 WRKY Transcription Factor Family AT4G12020 35.116 3.28e-101 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01747 - - pvu:PHAVU_010G131900g 1604.73