Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01746 ATGCAGAGTGTAGTCAACCCAATGTGTTTCCGAGTTTCTCATAGAATCAAATATGTTGTATTCATTTGTCTGCTGTTTGTAACATCTTCTACTTGTTCCAATCACACTTCTCAAATAAAGTACGATGTATTTGTTAGCTTCAGAGGTGTAGATGTCCGTCGAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCAGAAGCAAATTGCTTTCTTCGTAGATGATAACATTCAGAAAGGAGAAGAACTTTCTGAAGCACTATTAGGAGCCATTGAAGAATCATTAATTTCTTTGGTTATATTTTCAGAAAATTATGCTTCTTCAAGATGGTGTTTGTTAGAACTTGAGAAAATTTTGGAGTGCAGGAGAAAAAATGGACAAATTGTAATGCCTATTTTCTACGAAGTAGATCCTTCAGAGGTACGGCATCAAAGGAGGACTTATGGAGATGCCTTTGTTAAACATGAAAGAAAGTATTCCTTGACTACTGTGCAAAGCTGGCGATCTGCTTTGACTGAATCTGCTAATCTATCAGGATTTCATTCATCAATTTTTCAAGATGATGCTGAACTTGTTAAAAAGACAGTTAAATTTGTGTGGAGGACGTTGAATCATGTTCACCAAGTTAACTCCAAAGGGCTTGTTGGAATTGGTAAACGAATTGCCCATGTTGAATCATTGCTGCAATTAGAAGCAACAGATGTTCGCATGATTGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACTATTGCACAAGAAGTATATAATAAACTGTGTTTTGAATATGATAGTTGTTGTTTTCTGGCTAACATAAGGGAAGAGTCAGGAAGACATGGAATAATCTCTTTGAAGAAAAAGCTTTTTTCAACATTATTAGGAGAAGAACATTTGAAAATTGACATATCAAATGGGTGGCAGAAGTTAGTTGAGAGAAGACTTCATCGCTTGAAGGTTCTTATTATTCTCGATGATGTCGATGACTCAGAGCAACTAGAAATCTTAGCTAGAACAGCTTGGTTTGGATCTGGTAGTAGAATCATTGTGACAACCAGAGATAAACAGGTTCTTGCTAAAGAGTTTGCTAATGTATACCAAGTTGAGGCCTTAAACTTTGATGAATCTTTGCGACTTTTCAATCTAAATGCCTTTAAGCAAAAACATCTACAAGCAGAGTACCAGGAACTGTCAAAGAAAGTGGTTGATTATGCCAAAGGCATTCCCTTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGGAAAGATAAAGAGATATGGGAAAGTCAATTAGAAGGACAAATGCACAACAAAAAGGTTCATGATATTATTAAATTGAGTTACAATGATCTTGAGGTGGATGAAAAGAGGATTTTTTTGGATATTGCATGTTTTTTTTATGGGCTGCAACTGGAGGTAAAGTACATAGATTTTTTATTGAAAGATCGTGATTATTCAGTGGCTGCGGGATTGGAAAGGTTGAAGGATAAAGCTCTTATCAGCATTTCTCAAGAAAATACTGTATCAATGCATGACATTATACAAGAAACTGCTAGGCAGATTGCTGGCCAAGAATCTATTGAAGACCCCAGAAGTCAGAGGCGACTATTTGATCCTGATGGCATTTATGAAGTACTAACACACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCATCAACTTGCTGAGAATGAAGCAACTACATTTAAAGCCAGAAGTATTTACTAAGATGAGGAAGCTCCACTTTCTAAATTTATACACTGCAGGAACTCGTGATATTCTCCTCTGTGAACCGTGGGGCTTGTATCTTCCTCAAGGGCTTGAATCTCTGCCAAATGAGCTAAGATATCTTGGTTGGACGAATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCTGCAGAAAATCTAGTAGAGTTGCATTTGCCATATAGCCGGGTGAAAAAACTATGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTATCCTGCATTCATCCTCAAACATAAAGGAGCTGCTAGACTTTTCAAAGGCCCCAAACCTTGAAGTAATAGATCTTCGATTCTGTGTAGGGTTGACCAGTGTTCATCCATCAATTTTCTCTCTCAAAAATCTTGAGAAGTTAGATTTGGATGGATGCACGTCCCTCACAAGCCTTCGAAGCAATATCCATTTGGACTCTCTTCGTTATCTCTCCCTCTACAGCTGCATGGAACTAAAGGATTTCTCAGTGACCTCAGAGAATATGATAAGGTTGAATTTAGAACGCACCAGTATCAGGCAACTCCCTTCATCTATTGGATCTCAAAGCAAGCTTGAAAAGTTAAACCTTGCATTCACTTACATTGAGAGCTTGCCTGAAAGCATAAAAAATCTTAAAGGGTTGCGACATCTGGATCTACGATACTGTGAGAAGCTTAGGTCCCTACCAAAGCTTCCTCCATCAATTGAAACACTAGATGTCCGTGAATGCGTATCACTGGAGAGTGTAACTTTCCCTTCTATTGCTGAACAATGGAAGGAAAATAAGAAAAAGGTTGTCTTTTGGAACTGCTTTAAATTGGATGAGCATTCTCTCACGGCTATTGAGACGAATGCTAAAATCAACATGGTGAAATTTGCACACCAGCATTTGTCTACATCTGGTGATGCTCAAGGTATTTATGTGTACCCAGGAAGCCAAGTTCCAGAATGGTTGATCCATAAGGCCACACATGATGATTACATAACTATTGCTCCACATTCTTCTCACTTGGGCTACATCTTTTGCTTCATTTTACCGGAAGTGCCGTATGGGGAAAGGGTCTTGAAATTGAAGATTAGTACTGAAGGTGAAGATGAAGGTGAAGATGAAGGTGAAGGTGAAGATGACAGTATGATTGTGTACTTGGATAGACCACATCATGGGATTAAGTTGGATCACGTGTATCTGATGTACAACCAAGCATGTTCTCGCTTTCTACAAAGTCGTGCCAAACATCAAGCAATGTTGAAAATTAAGGTTACAGTAGCATCACTAGCACTCTCATCCGAATACATACAGGTGCAGTTAAGAGGGTTTGGGGTCAGCACAATCAGCAATTTTCTTCAGAAACAAAAATTGGGTGATGCTCGAATTCCAAAGGAAGTTTATGAAGTCTACCCTGTTTCTGTGTGGAACAGGTGA 3168 0.3864 MQSVVNPMCFRVSHRIKYVVFICLLFVTSSTCSNHTSQIKYDVFVSFRGVDVRRGFLSHLIEAFSQKQIAFFVDDNIQKGEELSEALLGAIEESLISLVIFSENYASSRWCLLELEKILECRRKNGQIVMPIFYEVDPSEVRHQRRTYGDAFVKHERKYSLTTVQSWRSALTESANLSGFHSSIFQDDAELVKKTVKFVWRTLNHVHQVNSKGLVGIGKRIAHVESLLQLEATDVRMIGIWGMGGIGKTTIAQEVYNKLCFEYDSCCFLANIREESGRHGIISLKKKLFSTLLGEEHLKIDISNGWQKLVERRLHRLKVLIILDDVDDSEQLEILARTAWFGSGSRIIVTTRDKQVLAKEFANVYQVEALNFDESLRLFNLNAFKQKHLQAEYQELSKKVVDYAKGIPFVLKLLGHRLHGKDKEIWESQLEGQMHNKKVHDIIKLSYNDLEVDEKRIFLDIACFFYGLQLEVKYIDFLLKDRDYSVAAGLERLKDKALISISQENTVSMHDIIQETARQIAGQESIEDPRSQRRLFDPDGIYEVLTHNKGNEAIRSIVINLLRMKQLHLKPEVFTKMRKLHFLNLYTAGTRDILLCEPWGLYLPQGLESLPNELRYLGWTNYPLESLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNLKVLILHSSSNIKELLDFSKAPNLEVIDLRFCVGLTSVHPSIFSLKNLEKLDLDGCTSLTSLRSNIHLDSLRYLSLYSCMELKDFSVTSENMIRLNLERTSIRQLPSSIGSQSKLEKLNLAFTYIESLPESIKNLKGLRHLDLRYCEKLRSLPKLPPSIETLDVRECVSLESVTFPSIAEQWKENKKKVVFWNCFKLDEHSLTAIETNAKINMVKFAHQHLSTSGDAQGIYVYPGSQVPEWLIHKATHDDYITIAPHSSHLGYIFCFILPEVPYGERVLKLKISTEGEDEGEDEGEGEDDSMIVYLDRPHHGIKLDHVYLMYNQACSRFLQSRAKHQAMLKIKVTVASLALSSEYIQVQLRGFGVSTISNFLQKQKLGDARIPKEVYEVYPVSVWNR* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01746 1055 ProSiteProfiles TIR domain profile. 39 203 IPR000157 GO:0007165
Phac10g01746 1055 Pfam NB-ARC domain 227 440 IPR002182 GO:0043531
Phac10g01746 1055 SUPERFAMILY "Winged helix" DNA-binding domain 437 545 IPR036390 -
Phac10g01746 1055 PRINTS Disease resistance protein signature 701 717 - -
Phac10g01746 1055 PRINTS Disease resistance protein signature 237 252 - -
Phac10g01746 1055 PRINTS Disease resistance protein signature 404 418 - -
Phac10g01746 1055 PRINTS Disease resistance protein signature 313 327 - -
Phac10g01746 1055 Gene3D - 208 366 IPR027417 -
Phac10g01746 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 180 IPR035897 -
Phac10g01746 1055 FunFam Disease resistance protein (TIR-NBS-LRR class) 37 205 - -
Phac10g01746 1055 Gene3D Ribonuclease Inhibitor 747 891 IPR032675 -
Phac10g01746 1055 Gene3D Ribonuclease Inhibitor 514 746 IPR032675 -
Phac10g01746 1055 SMART till_3 40 177 IPR000157 GO:0007165
Phac10g01746 1055 Gene3D - 38 207 IPR035897 -
Phac10g01746 1055 Pfam TIR domain 40 215 IPR000157 GO:0007165
Phac10g01746 1055 Pfam Leucine Rich Repeat 635 653 IPR011713 -
Phac10g01746 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 461 IPR027417 -
Phac10g01746 1055 Gene3D - 369 451 IPR042197 -
Phac10g01746 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 827 IPR044974 GO:0006952
Phac10g01746 1055 SUPERFAMILY L domain-like 558 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01746 Phac-Chr10 40184634 40188181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01746 36 811 WRKY Transcription Factor Family AT4G12020 33.376 2.00e-105 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01746 - - pvu:PHAVU_010G131900g 1841.24