Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01728 ATGCGACTTTTCAATTTAAATGCCTTTAAGCAAAAACATCTACAAGCAGAGTACCAGGAACAGTCAAAGAAAGTGGTTGATTATGCCAAAGGCATTCCCTTTGTTCTGAAACTTTTGGGTCACCGTCTTCATGGGAAAGATAGAGAGATATGGGAAAGTCAATTAGAAGGACAAGTGCACAACAAAAAGGTTCATGATATTATTAAATTGAGTTACAATGATCTTGAGGAGGACGAAAAGAAGATTTTTTTGGATATTGCATTTTTCTTTTATGGGCTGCAACTGGAGGAAAATACTGTATCAATGCATGACATTATACAAGAAACTGCTAGGCAGATTGCTGGCCAAGAATCTATTGAAGACCCCAGAAGCCAGAGGCGACTATTTGATCCTGATGGCGTTTATGAAGTAGGTAACGAGGCTATCAGAAGCATAGTCATCAACATGTTGAGAATGAAGCAACTACATTTAAAGCCACAAGTATTTACTAAGATGAGGAAGCTCCACTTTCTAAATTTGTACACTGCAGGAACTCGTGATATTCTCCTCTGTGAACCGTGGGGCTTGTATCTTCCTCAAGGACTTGAATCTCTGCCGAATGAGCTAAGATATCTTGGTTGGACGAATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCCGCAGAAAATCTAGTAGAGTTGCATTTGCCATATAGTCGGGTGAAAAAACTATGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTATCCTGCATTCATCCTCAAACATAAAGGAGCTGCTAGACTTTTCAAAGGCCCCAAACCTTGAAGTAATAGATCTCGATTCTGTGTAG 837 0.3943 MRLFNLNAFKQKHLQAEYQEQSKKVVDYAKGIPFVLKLLGHRLHGKDREIWESQLEGQVHNKKVHDIIKLSYNDLEEDEKKIFLDIAFFFYGLQLEENTVSMHDIIQETARQIAGQESIEDPRSQRRLFDPDGVYEVGNEAIRSIVINMLRMKQLHLKPQVFTKMRKLHFLNLYTAGTRDILLCEPWGLYLPQGLESLPNELRYLGWTNYPLESLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNLKVLILHSSSNIKELLDFSKAPNLEVIDLDSV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01728 278 SUPERFAMILY L domain-like 146 277 - -
Phac10g01728 278 Pfam Leucine Rich Repeat 223 241 IPR011713 -
Phac10g01728 278 Gene3D - 1 76 IPR042197 -
Phac10g01728 278 Gene3D Ribonuclease Inhibitor 137 278 IPR032675 -
Phac10g01728 278 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 276 IPR044974 GO:0006952
Phac10g01728 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 86 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01728 Phac-Chr10 40061403 40062774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01728 18 278 WRKY Transcription Factor Family AT4G12020 34.202 1.02e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01728 - - pvu:PHAVU_010G131200g 514.998