Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01717 ATGATGTCTGCAGGTTTAAAGCGATGTGGGAAAAGCTGCAGACAAAGGTGGCTGAACTATCTCAAGCCTGGTATTAAAAGAGGTGACATCTCTGTGGATGAAGAAGATATGATTATCAGACTTCATCGTCTTCTTGGTAACAGATGGGCATTGATAGCAAAGAGGCTACCTGGACGAACAGACAATGAAATCAAGAACTACTGGAACACCAATCTGTCAAAGAAGTTACAGAAACACCCTACATCATCCTCCTCTGTTTCTTCACTTCAACACAAACGTGGCGAAGAAGAGAAGATGAAGCAAGTGCATGTAGCACCCGAAGCTCCACGCCCTAGGAGAGTTAGTGCAGTTGAATACAGTAAAATGTGTAGTACCACTCCCAGTCCCTCAAATAAAGTGGAGGGTAGTAGTGATGAAGCTTGTTTTAGTGATTTCCTCATCGATATTGATCAAAACCAGTTGTTGATTGGTGATGATTCCAGCTCCAAGGTCCCACAAACAGATGAAGAGCAGAACAACAAACAGGTAGTCTTAACCAACAGTCCTAGCTCATCATCACCTTCTCATCATTGTCACAATCTCTTGGCAGAGAAATTCGACCCTCTGGAGACCCTCTTGGATGTGGAACTCAAGAGGATGGCTTCCTTTCTTGGACTTGAAAATGATTGA 669 0.4335 MMSAGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQKHPTSSSSVSSLQHKRGEEEKMKQVHVAPEAPRPRRVSAVEYSKMCSTTPSPSNKVEGSSDEACFSDFLIDIDQNQLLIGDDSSSKVPQTDEEQNNKQVVLTNSPSSSSPSHHCHNLLAEKFDPLETLLDVELKRMASFLGLEND* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01717 222 Gene3D - 31 103 - -
Phac10g01717 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 76 IPR017930 -
Phac10g01717 222 MobiDBLite consensus disorder prediction 157 190 - -
Phac10g01717 222 SUPERFAMILY Homeodomain-like 7 81 IPR009057 -
Phac10g01717 222 MobiDBLite consensus disorder prediction 90 107 - -
Phac10g01717 222 ProSiteProfiles Myb-like domain profile. 22 72 IPR001005 -
Phac10g01717 222 SMART sant 26 74 IPR001005 -
Phac10g01717 222 MobiDBLite consensus disorder prediction 75 111 - -
Phac10g01717 222 FunFam Transcription factor TT2 30 102 - -
Phac10g01717 222 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 162 - -
Phac10g01717 222 MobiDBLite consensus disorder prediction 75 89 - -
Phac10g01717 222 Gene3D - 2 26 - -
Phac10g01717 222 CDD SANT 31 72 IPR001005 -
Phac10g01717 222 Pfam Myb-like DNA-binding domain 28 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01717 Phac-Chr10 39990566 39992786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01717 5 151 MYB Transcription Factor Family AT5G35550 48.993 7.17e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac10g01717 Myb_DNA-binding 2.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01717 K09422 - gmx:547568 340.117