Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01712 ATGAGTAACTGGTTGGGGTTCTCTCTGACTCCACACTTGAGGATTGATGAAGAATTTGGGAGAGAAAACCAAGAGCGTGGAGGAGGAGGAGGAGGTGGAGGAGAAGGAGGAGGGTATCATCCTCGTCCTTCTTCTCACCCTCACATGTCTGTTATGCCTTTGCGCTCTGATGGCTCTCTGTGTGTTGCTGACTCCTTCACCCACTCTGCTGCTCCTCAAGAATGGAGATATGATAGTGCAATAGGTGGAGGGAATTCCAATGAAAAAGGTCCAAAGCTTGAGGACTTTTTGGGCTGCTACTCAAACTCCCCCAATAAAGTCTTTTGTCAAGATTCTCAACATGACCAAAACCAAAGCCAGAGCAATGTTTCCAAAATCAATGTTAATGTGGCACCAAGCTTTTGCACCAATGCCGAGATTGAAACTGGGGATTGCCTCACAAACCCTTCTTCCTTGCTTCAATCTTTCCATGCATACAGTGATAACCCACATGCCCTCATCCCGACCAATGGCATGTACAAGTCCTGGTTGGCACAAACTCAGTTTTCTGATGTAAAGCCATCAACTGAGGCAAATGGGTGTAATTTCCAATCACTGTCCCTCACCATGAGCCCCACTGTGCAGAATGGGATGGGTGCAATTTCCCCTGTTCAGGCTATTGAGGACAATAGGAAACGGGCCATGGCTAAATCTCATGCTAGAGAACCAGTTCCTCGCAAATCTATTGACACTTTTGGGCAGAGAACCTCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAACAGTTGCAGAAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGTCTACCTTGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGGGCATCTGTGTATAGAGGTGTGACAAGGCACCACCAACATGGAAGGTGGCAGGCCCGAATCGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTCAGTACTCAAGAAGAAGCTGCCGAAGCATACGACATTGCAGCTATCAAGTTCAGAGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGTTCCACTCTCATTGCAGGAGATCTTGCAAAACGGTCCCCAAAAACAGAATCACCAGCTGCTGTTGCTGCGGATGACATCAACACAAGCAGTTCTTCTGTGCCGACTCAGCCACCTCCCTTGGCAATAACTGAAGGTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGGCAACGGTGATGAGCAAGCACATAATGAGAGTGCTAACATCAACAATATCGCTGAATCATCACAGCAAGTTTCTCCAAGCCACAGCAAGGTTGGTTTGAACCCTGAAAGTCCCCCCAAGTGTTCTGTGGGGCTAACCAATGAGTTTGGAGTGAGTGGAACAGACTATGGACATGGGTACTTCACCCTGGATGGACCAAAATATGATGATGGGAACAATGAAAACGACCACATGAGCAGCAGCAGGCTTGGAAACATGGGACTTGTTAATCAAGTTCCCATGTTTGCTTTGTGGAATGAATGA 1743 0.463 MSNWLGFSLTPHLRIDEEFGRENQERGGGGGGGGEGGGYHPRPSSHPHMSVMPLRSDGSLCVADSFTHSAAPQEWRYDSAIGGGNSNEKGPKLEDFLGCYSNSPNKVFCQDSQHDQNQSQSNVSKINVNVAPSFCTNAEIETGDCLTNPSSLLQSFHAYSDNPHALIPTNGMYKSWLAQTQFSDVKPSTEANGCNFQSLSLTMSPTVQNGMGAISPVQAIEDNRKRAMAKSHAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKTESPAAVAADDINTSSSSVPTQPPPLAITEGEHSDELSNMMWNGNGDEQAHNESANINNIAESSQQVSPSHSKVGLNPESPPKCSVGLTNEFGVSGTDYGHGYFTLDGPKYDDGNNENDHMSSSRLGNMGLVNQVPMFALWNE* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01712 580 MobiDBLite consensus disorder prediction 20 53 - -
Phac10g01712 580 FunFam AP2-like ethylene-responsive transcription factor ANT 250 319 - -
Phac10g01712 580 ProSiteProfiles AP2/ERF domain profile. 353 411 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 CDD AP2 352 413 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 PRINTS Ethylene responsive element binding protein signature 252 263 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 PRINTS Ethylene responsive element binding protein signature 393 413 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 ProSiteProfiles AP2/ERF domain profile. 251 317 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 MobiDBLite consensus disorder prediction 435 463 - -
Phac10g01712 580 Gene3D AP2/ERF domain 353 413 IPR036955 GO:0003700|GO:0006355
Phac10g01712 580 Gene3D AP2/ERF domain 250 319 IPR036955 GO:0003700|GO:0006355
Phac10g01712 580 FunFam AP2-like ethylene-responsive transcription factor 352 413 - -
Phac10g01712 580 CDD AP2 250 319 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 MobiDBLite consensus disorder prediction 445 461 - -
Phac10g01712 580 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 88 491 - -
Phac10g01712 580 SUPERFAMILY DNA-binding domain 352 413 IPR016177 GO:0003677
Phac10g01712 580 SUPERFAMILY DNA-binding domain 250 319 IPR016177 GO:0003677
Phac10g01712 580 SMART rav1_2 251 323 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 SMART rav1_2 353 417 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 Pfam AP2 domain 352 403 IPR001471 GO:0003700|GO:0006355
Phac10g01712 580 Pfam AP2 domain 251 309 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01712 Phac-Chr10 39935266 39939299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01712 1 438 AP2-EREBP Transcription Factor Family AT1G72570 50.426 9.52e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac10g01712 AP2 4.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01712 K09285 - gmx:100805489 1003.05