Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01709 ATGATGAGTGCAAGTGCAAGTGCCAGAAATAGATCTCCTTTCACACCAACTCAGTGGCAAGAGCTTGAGCAACAAGCTCTTGTTTTCAAATACATGGTCACAGGAACACCTATCCCCCCAGATCTCATCTACTCTATTAAAAGAAGTCTGGATTCTTCAATTTCTTCAAGACTCTTCCCACACCATCCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAGCAACAAGCACCGCCACAAACACCTCCCAAACAATCCCATCTTATACCAGAAACCTTTCCTTGACAAACCCCACCATAACTTCACCCTCTTTCCCTTTCTCCCCTTTGCCCTCTTCTTTGTCCTGTGACTCCCAACCCTTTTCCCAATCCTACCAAAACCCTTCTCTCAATCCCTTCTTCTACGCCCAATCAACCTCCTCTAGACCCCCAGATTCTGATTTTCCACCTCAAGATGCCACTACCCACCAGCTATTCATGGATTCTGGGTCTTATTCTCATGATGAGAAGGATTATAGGCATGTTCATGGAATAAGGGAAGATGTGGATGAGAGAGCTTTCTTCCCAGAAGCTTCAGGATCAGCGAGGAGCTATACTGACTCGTATCAGCAACTATCAATGAGCTCCTACAAGTCCTATTCAAATTCCAACTTTCAGAACATCAATGATGCCACCAACCCAAGACAGCAAGAGCAACAACACTGCTTTGTTTTGGGGACTGACTTCAAATCAACAAGGCCAATCAAAGAGAAAGAAGCTGAGCCAACAAGCCAGAGACCCCTTCACCGTTTCTTTGGGGAGTGGCCACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATCCCAACCGATGAATGA 1020 0.4578 MMSASASARNRSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDSSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSATSTATNTSQTIPSYTRNLSLTNPTITSPSFPFSPLPSSLSCDSQPFSQSYQNPSLNPFFYAQSTSSRPPDSDFPPQDATTHQLFMDSGSYSHDEKDYRHVHGIREDVDERAFFPEASGSARSYTDSYQQLSMSSYKSYSNSNFQNINDATNPRQQEQQHCFVLGTDFKSTRPIKEKEAEPTSQRPLHRFFGEWPPKNTDSWLDLASNSRIPTDE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01709 339 MobiDBLite consensus disorder prediction 325 339 - -
Phac10g01709 339 MobiDBLite consensus disorder prediction 296 339 - -
Phac10g01709 339 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g01709 339 MobiDBLite consensus disorder prediction 109 145 - -
Phac10g01709 339 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Phac10g01709 339 Pfam WRC 79 121 IPR014977 -
Phac10g01709 339 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g01709 339 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g01709 339 MobiDBLite consensus disorder prediction 182 206 - -
Phac10g01709 339 PANTHER GROWTH-REGULATING FACTOR 5 12 327 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac10g01709 339 MobiDBLite consensus disorder prediction 119 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01709 Phac-Chr10 39911414 39915787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01709 1 317 GRF Transcription Factor Family AT3G13960 39.362 9.64e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac10g01709 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01709 - - gmx:100806024 580.096