Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01708 ATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGATGGGCATCTGTGTATAGAGGTGTGACAAGGCACCACCAACATGGAAGGTGGCAGGCCCGAATCGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTCAGTACTCAAGAAGAAGCTGCCGAAGCATACGACATTGCAGCTATCAAGTTCAGAGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGTTCCACTCTCATTGCAGGAGATCTTGCAAAACGGTCCCCAAAAACAGAATCACCAGCTGCTGTTGCTGCGGATGACATCAACACAAGCAGTTCTTCTGTGCCGACTCAGCCACCTCCTTTGGCAATAACTGAAGGTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGGCAATAGTGATGAGCAAGCACATAATGAGAGTGCTAACATCAACAATATCACTGAATCATCACAGCAAGTTTCTCCAAGCCACAGCAAGGTTGGTTTGAACCCTGAAAGTCCCCCCAAGTCAAAGGAAGTTTGA 594 0.4562 MKHMTRQEFVANLRRKSSGFSRWASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKTESPAAVAADDINTSSSSVPTQPPPLAITEGEHSDELSNMMWNGNSDEQAHNESANINNITESSQQVSPSHSKVGLNPESPPKSKEV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01708 197 CDD AP2 25 86 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 SUPERFAMILY DNA-binding domain 25 86 IPR016177 GO:0003677
Phac10g01708 197 MobiDBLite consensus disorder prediction 146 187 - -
Phac10g01708 197 FunFam AP2-like ethylene-responsive transcription factor 25 86 - -
Phac10g01708 197 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Phac10g01708 197 MobiDBLite consensus disorder prediction 118 134 - -
Phac10g01708 197 Pfam AP2 domain 25 76 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 159 - -
Phac10g01708 197 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
Phac10g01708 197 MobiDBLite consensus disorder prediction 105 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01708 Phac-Chr10 39893113 39893954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01708 20 89 AP2-EREBP Transcription Factor Family AT5G57390 39.744 2.72e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac10g01708 AP2 4.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01708 K09285 - gmx:100805489 308.531