Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01703 ATGAGTTCGATTCCCAGTAAGACAATTGCTGAGGGAGAGATTATTGTAGGTGACATCAATTATTGTGTGGCGGATGCTAGAAAGAAACACAATGCTGTGAGTTGCTTGTTGTGGCTAGTGGCCATGACACTCTGTGACAACACCTTTGTGGCAGTGCCTTTTGTTCTAATTGATGTTGGATGGCAGCCATCTACTGAGTATGTTGTTGTCAACATGGATGGCTCAAGACATCCGTTGCCTCTGACGACAGTTTATCATAAGTTGCAACCAATAAATGCTTCTCCTTATACTTTCTTGCAAGCACTTTTTGGACATGAATATCCGGTCGGACTGCTAGATGAAGAGAAAATACTTCCAGTGGGGAAGGATGTCACTGCTGTTGGCCTTGTCAGTCTAAATAATGGAGTTGCTGAAATTAAGTCATGCAAAGATCTACCATATTTTCTATCTGACTTGAGCAAAGATCAGATGATAGTGGATCTTTCTATCAAAACGAAAATTCTGTTTTGGGGTGGCATTGCTCTCGGTTCAATGTCAGTTGGTATCCTTGGCTATGCAGTTGTGAGGAACTGGAACAAGTGGAAACAGTGGAAGCTACAGAGGCAGCTCCAGCAACAAAGGCAAGCAGTGAGTGATGTTGAACCTCAGGTGGATGATGAGATTGAAGATGTCCCAGATGGACAATTATGTGTTATATGTCTGATGAGGAGAAGGCGTTCTGTCTTCATCCCCTGTGGCCACCTTGTGTGTTGCCAAGGGTGTGCCATATCAGTTGAACATGAAGTGGCACCTAAATGTCCTGTTTGTCGTCAGGAGATTCGAAATTCAGTGCGGATTTTTGAATCATGA 849 0.4346 MSSIPSKTIAEGEIIVGDINYCVADARKKHNAVSCLLWLVAMTLCDNTFVAVPFVLIDVGWQPSTEYVVVNMDGSRHPLPLTTVYHKLQPINASPYTFLQALFGHEYPVGLLDEEKILPVGKDVTAVGLVSLNNGVAEIKSCKDLPYFLSDLSKDQMIVDLSIKTKILFWGGIALGSMSVGILGYAVVRNWNKWKQWKLQRQLQQQRQAVSDVEPQVDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEHEVAPKCPVCRQEIRNSVRIFES* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01703 282 SMART ring_2 230 269 IPR001841 -
Phac10g01703 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 47 282 IPR044247 GO:0004842
Phac10g01703 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 282 IPR013083 -
Phac10g01703 282 Pfam E3 Ubiquitin ligase 50 182 IPR022170 GO:0004842|GO:0006996|GO:0016567
Phac10g01703 282 ProSiteProfiles Zinc finger RING-type profile. 230 270 IPR001841 -
Phac10g01703 282 Pfam Zinc finger, C3HC4 type (RING finger) 228 275 - -
Phac10g01703 282 SUPERFAMILY RING/U-box 229 276 - -
Phac10g01703 282 CDD RING-HC_SPL2-like 225 271 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01703 221 279 C3H Transcription Factor Family AT3G06140 33.898 6.58e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01703 K15688 - gmx:100785166 404.06