Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01674 ATGCAGGGGTCACAAGAAAAAACAGGGGAAAAACGAAAAAGTAGCAGAAGCAATGACCCGGAAAAAAAAATCACAATCACATTCCTTAGTTCAGAATACGCCCTGAGGCACCAAATTTTGAGCAGAGCAATGGCCATAGCTCCGGCAATAATTCTCCACCCAACTCTCATCATCATTGTCACTTTGCCTGTGATATATTCCATGACAGAAGCTGAAGCTTTGGTGAGTCTCAAAAGCACTTTCTCCAACGCTGAACTTTTGGATGGTTGGGTGGCTGATACTGCACCTTGTAGTGTAGAAGATCAATGGGAAGGTATTGTTTGCAACAATGGCCTTGTCACGGGGCTTCGCCTTGGAGGAATAGGGTTAATCGGGGAAATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGAACTATTAGCATTAACAACAATTCTTTCTCAGGGTCCATGCCAGAGTTCAACCGAATAGGGTTCTTGAAAGCCCTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCTTCGGAATACTTCCAGAGAATGAAGTCTTTGAAGAAAGTGTGGCTTTCTGATAACCAATTCACGGGGAGTATTCCAAATTCATTGACCGAAGTTCCTAGTCTTGTGGAGTTGCACCTTGAAAATAACCAGTTTAGTGGAACCATTCCTGAATTGAATAACCCATCATTGGAGAAATTAGATGTTTCCAACAACAAATTGGAAGGTGAAATTCCAGCTAGTTTGTTGAGATTCAGTGAGAGCTCGTTTTCAGGGAATTCTGGTCTTTGTGGTGAGAGGGCTGGCAAACCATGTAAACAGCCAATGGAGATCCCAAGTCCTGCTCCTATGGTTGCATCAGATGCAGAAGATAATGCACAAGATGATGGTGGTGGTGATGCGCCTGTTCCACATAAGAGTACCTCATGGGAGGTTACTGGCATTATAATAGGGAGTGTAGTGCTTATCTCAATAATTGTATTTTGTATTGTGAGAACAAGGCGAAAGAAGGAGGAGGAGAACTTTGATGTTTTTGGAAATTATACTAATGGTGGTTCAGTGGAAGTTCAAGTGACTGCACCGGTGAAAAGGGATGTGGAAGCAAGTACAAGTGCACCAGTTAGGAAATCATCATCCAGAAGGGGATCTACAAGTTCTCAGAGCAAAGGCGTTGGAGAACTTGTGATGGTAAATGATGAGAAGGGTGTGTTTGGGTTGCCAGATTTGATGAGGGCAGCTGCGGAAGTGCTGGGAAATGGAGGCTTTGGATCTTCTTACAAAGCCGTCATGGCTAATGGAGTGGCAGTGGTGGTGAAAAGGACCAGAGAGATGAATGCTTTGGATAAAGATGGTTTTGATGCAGAGATGAGGAAGCTCACAGCGCTTAAACACTGGAATATATTGACCCCTTTAGCATATCATTTCAGAAGGGAGGAGAAACTAGTGATCTCTGAGTATGTTCCCAGAGGCAGTCTACTGTTTTCACTGCATGGTGACAGAGGACCATCGCATGCTGATCTAGATTGGCCTGCACGTATGAAGATTGTTCATGGAATTGCCGAAGGGATGCGTTATCTTCACAGAGAACTTGGTTCCTCGGATCTCCCACATGGCAACCTGAAGTCCAGCAACGTTCTTCTGGGACCAGACAACGAAGCATTGCTGGTAGATTACGGGTTCAGCCACATGGTTAACCCTTCAAATGCTGCACAGACACTATTTGCTTTCAGGGCACCAGAGGCAGTACAACATAACCAAATTTCACATAGCTGTGATGTTTACTGTCTTGGGGTTGTGATTCTGGAGATTCTCACTGGGAAATTCCCTTCTCAATATCTTAGCACTGGGAAGGGTGGAACCGATGTGGTGCAGTGGGTTGAAACAGCAATCTCTGAGGGGAGGGAATCAGAAGTGGTTGATCCAGAAATTGCAAGCTCTAGGATTTGGGTAGGTGAGATGAAGAAACTCCTGCACGTTGGTTCTGCTTGCACTGAAAGTAACCCTGTGCAACGGTTAGGGTTGGAGGAAGCCTTTAGAAGGATAGAGGAGATAAGATTGGAGGGTGGCCATGGCCAAGAATCAAGAACAATAGAGGTGTTGCCATGTCATAGACGTGGGTCTGCAGGTTCACAACAATTTGAGAACCAAGGGCCTTTTGACCCCTCACGGAGGAGACATGGAACAAACAGCTTCGGAAGTGAGGATAATGTTGAACTTGGCACCTCCTAG 2232 0.4507 MQGSQEKTGEKRKSSRSNDPEKKITITFLSSEYALRHQILSRAMAIAPAIILHPTLIIIVTLPVIYSMTEAEALVSLKSTFSNAELLDGWVADTAPCSVEDQWEGIVCNNGLVTGLRLGGIGLIGEIHVDPLLELKGLRTISINNNSFSGSMPEFNRIGFLKALYLQGNKFSGDIPSEYFQRMKSLKKVWLSDNQFTGSIPNSLTEVPSLVELHLENNQFSGTIPELNNPSLEKLDVSNNKLEGEIPASLLRFSESSFSGNSGLCGERAGKPCKQPMEIPSPAPMVASDAEDNAQDDGGGDAPVPHKSTSWEVTGIIIGSVVLISIIVFCIVRTRRKKEEENFDVFGNYTNGGSVEVQVTAPVKRDVEASTSAPVRKSSSRRGSTSSQSKGVGELVMVNDEKGVFGLPDLMRAAAEVLGNGGFGSSYKAVMANGVAVVVKRTREMNALDKDGFDAEMRKLTALKHWNILTPLAYHFRREEKLVISEYVPRGSLLFSLHGDRGPSHADLDWPARMKIVHGIAEGMRYLHRELGSSDLPHGNLKSSNVLLGPDNEALLVDYGFSHMVNPSNAAQTLFAFRAPEAVQHNQISHSCDVYCLGVVILEILTGKFPSQYLSTGKGGTDVVQWVETAISEGRESEVVDPEIASSRIWVGEMKKLLHVGSACTESNPVQRLGLEEAFRRIEEIRLEGGHGQESRTIEVLPCHRRGSAGSQQFENQGPFDPSRRRHGTNSFGSEDNVELGTS* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01674 743 Gene3D Ribonuclease Inhibitor 62 155 IPR032675 -
Phac10g01674 743 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 61 686 IPR046959 -
Phac10g01674 743 MobiDBLite consensus disorder prediction 708 743 - -
Phac10g01674 743 SUPERFAMILY L domain-like 90 253 - -
Phac10g01674 743 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 153 273 - -
Phac10g01674 743 Gene3D Ribonuclease Inhibitor 156 275 IPR032675 -
Phac10g01674 743 Gene3D Phosphorylase Kinase; domain 1 384 487 - -
Phac10g01674 743 Gene3D Transferase(Phosphotransferase) domain 1 488 692 - -
Phac10g01674 743 SUPERFAMILY Protein kinase-like (PK-like) 416 682 IPR011009 -
Phac10g01674 743 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Phac10g01674 743 MobiDBLite consensus disorder prediction 275 307 - -
Phac10g01674 743 MobiDBLite consensus disorder prediction 366 391 - -
Phac10g01674 743 Pfam Protein kinase domain 416 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01674 743 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01674 743 MobiDBLite consensus disorder prediction 372 391 - -
Phac10g01674 743 Pfam Leucine Rich Repeat 231 251 IPR001611 GO:0005515
Phac10g01674 743 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01674 Phac-Chr10 39618617 39621380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01674 46 687 Receptor kinase-like Gene Family AT3G42880 43.683 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac10g01674 Pkinase 3.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01674 - - var:108346415 1152.5