Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01661 ATGGCTAATGAAGGAAACAAAAGCAGTGACTTCTATACGATCTTGGGGTTGAAAAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAAAAGAAATTCCAGGAAATTGGGGAGGCCTATTCTGTTTTATCTGACGCCAACAAAAGATTAATGTACGACGTTGGAGTCTACGATAGTGATGACGACGAAAACGGCATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATTGGATTGGATGGAAGCTCTTCTCTTTCTGCTGCCAATTGCTCTACTTCATCTGCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGGCAGAGGATTCCTCAGTCTTTGATACCAGTTACCAGAATTTCTGTTTTGGGGTCGGTCATGTAAACTATCATTACCAATGA 591 0.4044 MANEGNKSSDFYTILGLKKECTELELKNAYKKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFEDMFQADIGLDGSSSLSAANCSTSSAYMTYSESSSSNKRNSTEMKFGKAEDSSVFDTSYQNFCFGVGHVNYHYQ* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01661 196 PANTHER PUTATIVE, EXPRESSED-RELATED 2 177 - -
Phac10g01661 196 CDD DnaJ 10 70 IPR001623 -
Phac10g01661 196 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Phac10g01661 196 PRINTS DnaJ domain signature 53 73 IPR001623 -
Phac10g01661 196 PRINTS DnaJ domain signature 30 45 IPR001623 -
Phac10g01661 196 PRINTS DnaJ domain signature 73 92 IPR001623 -
Phac10g01661 196 PRINTS DnaJ domain signature 12 30 IPR001623 -
Phac10g01661 196 Gene3D DnaJ domain 7 136 IPR036869 -
Phac10g01661 196 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Phac10g01661 196 SMART dnaj_3 9 73 IPR001623 -
Phac10g01661 196 Pfam DnaJ domain 10 78 IPR001623 -
Phac10g01661 196 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01661 Phac-Chr10 39535532 39538916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01661 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 7.55e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01661 - - gmx:100791192 325.865