Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01660 ATGGCTAATGAAGGAAACAAAAGCAGTGACTTCTATACGATCTTGGGGTTGAAAAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAAAAGAAATTCCAGGAAATTGGGGAGGCCTATTCTGTTTTATCTGACGCCAACAAAAGATTAATGTACGACGTTGGAGTCTACGATAGTGATGACGACGAAAACGGCATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATTGGATTGGATGGAAGCTCTTCTCTTTCTGCTGCCAATTGCTCTACTTCATCTGCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGGCAGAGGATTCCTCAGTCTTTGATACCAGTTACCAGAATTTCTGTTTTGGGGTGAACCTACTCCAAGATATAGAGGAGGAAAAGGAGGGAATTCCAGAAGGAGGAGGTAGCAAAAGATATAGAAATGGCAGAAAGCAAAAAATGTCCTACGAACATGATGTTTAA 675 0.4044 MANEGNKSSDFYTILGLKKECTELELKNAYKKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFEDMFQADIGLDGSSSLSAANCSTSSAYMTYSESSSSNKRNSTEMKFGKAEDSSVFDTSYQNFCFGVNLLQDIEEEKEGIPEGGGSKRYRNGRKQKMSYEHDV* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01660 224 CDD DnaJ 10 70 IPR001623 -
Phac10g01660 224 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Phac10g01660 224 PRINTS DnaJ domain signature 73 92 IPR001623 -
Phac10g01660 224 PRINTS DnaJ domain signature 30 45 IPR001623 -
Phac10g01660 224 PRINTS DnaJ domain signature 12 30 IPR001623 -
Phac10g01660 224 PRINTS DnaJ domain signature 53 73 IPR001623 -
Phac10g01660 224 MobiDBLite consensus disorder prediction 197 224 - -
Phac10g01660 224 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Phac10g01660 224 Gene3D DnaJ domain 7 135 IPR036869 -
Phac10g01660 224 PANTHER PUTATIVE, EXPRESSED-RELATED 2 181 - -
Phac10g01660 224 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Phac10g01660 224 SMART dnaj_3 9 73 IPR001623 -
Phac10g01660 224 Pfam DnaJ domain 10 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01660 Phac-Chr10 39535198 39538916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01660 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.17e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01660 - - gmx:100791192 366.311