Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01652 ATGGACGACGACGAAGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGTGTCGTCTCCGCGGGCCAACGGGCGGATAACGGTAACGGTCGCGGCGCCGGCGCCGTCGAATAGTTTGGCATTAGCGCTTCCGATTCAGCAGCCGTCGAAGGGGAACGGTGGGGGAGGAGGCGGCGGCGGTGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTACTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAACAGAAGCACTGGAAGGAGGTGGCGGATATTGTGAGCGGCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATTCAGTGCAAAAACCGGATCGACACCGTAAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTTCGACCGATTGGACAAATTAATCGGCCCAAGCGCCAAGATCCCCGGCGCCGGCGGCTCCTCCGGTACCGCCGGCACCAGCGCTGCCGGAAACAGTATTTTACAGCCGCAGAAAGTGCCTTTAGGGATTCCGGTCGGCATTCGCGACGGCGTGAATCAGTACCACCGTCCTCAAAGGCCGGCGCAGCAGCAACAACAGCAGCCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGATCCACCGTTGGAATCCGATTCGGACGAGCGTGGCGCGTCGTCGCCAGCCTCAAGCGACAGTTTTCCGCCGGAGAGTTTCGAGCGGAAGAGGCCGCGGGTGATGAGTTCGAACGCGGGGAAAGGAAGCGAAGGTAGACGGAAGGCGAAGGGCTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTTGGCGAGGCGTATGAACATGCGGAGAGCTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCGAAGGATTTGGAGTTGCAGAGGATGCAGTTTTTCATGAAGACACAATTGGAGATTTCGCAACTCAAGCTTGGAAGAAAAGGTGCTAATCCTAGCAACAATCACCATAGCACCAACATCAATAACAATAACAACAATCATAACAATAATAGTGACAGCGAGTGA 1128 0.578 MDDDEEIQSHPSPASGSPVSSPRANGRITVTVAAPAPSNSLALALPIQQPSKGNGGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFFDRLDKLIGPSAKIPGAGGSSGTAGTSAAGNSILQPQKVPLGIPVGIRDGVNQYHRPQRPAQQQQQQPVPLKNQKIQFRRRDPPLESDSDERGASSPASSDSFPPESFERKRPRVMSSNAGKGSEGRRKAKGWGSAVRELTQAILKFGEAYEHAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANPSNNHHSTNINNNNNNHNNNSDSE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01652 375 MobiDBLite consensus disorder prediction 44 67 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 345 375 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 347 375 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 169 183 - -
Phac10g01652 375 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 33 345 IPR044823 -
Phac10g01652 375 Gene3D - 69 134 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 158 284 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 224 238 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 205 222 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 10 28 - -
Phac10g01652 375 FunFam trihelix transcription factor ASIL2 69 134 - -
Phac10g01652 375 MobiDBLite consensus disorder prediction 1 28 - -
Phac10g01652 375 Pfam Myb/SANT-like DNA-binding domain 66 156 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01652 Phac-Chr10 39523581 39525943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01652 1 359 Trihelix Transcription Factor Family AT3G14180 48.624 9.20e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac10g01652 Myb_DNA-bind_4 7.4e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01652 - - gmx:100812599 528.094