Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01650 ATGGCTGATTCTTTTTCCTTTGAGGGTGACTCCTTCTCAAGCCACCAGAGACGATACCATCCAACACCAGTGAGTTATCACAGCGTGTCTGGCTCTTTCATACCATCCAGCTTTCATAGCGATGCCACTTCCACAACCAGAAGAGCTCGCCCCAACCGAGTTCCTGCCACACCCTTCGCTTCAGATGATGACCATTCATGGCAAGAAGAGGTTTCATGGAAGTTTGAGGCCACCGGGTGGCACCATTATAGCACAAACTTTGGTTCTCTTCTGACGCCATGGCCAGCTAGCTCCCCTTCTGATCACAGCCGTACATTTCGACAATCAGCCAATGACTTCTACCTTTCAAGAACAAGTAGGTTCAGAGGTCTCCCAAGCTCTTCTTATGAACATTCTACCCATGGTAGAGTTGAACTTAAGAGCTATGTTGCTAGGGACAATGATCATAGTTACTTTGATCAGCGTAGTGAGCCTCATGGATTATCCAAATCGGGGCAGAGTAGTAGAAAAGGTAAGAGCAGTCCATTGGCAGGGGAAGATGAGCTTAGTATGATAAATTATAGCATAACAGAAGAGCATCTAAATTCACCCAATGGGAATGGTCATGGTCTTGAATCCCCATATTTTAAAAATGGTCATGGACTACCTTCACATGATGGTAGCCATCTTTATGGAAGTGGTGGGGGTTATAGTTATCCTCACCATGACATTGAGAAGTATTCAGGATATGATGAAGAAGGAGAGGAGGATATGGATGAGGAAGATGCAAGTCCTCCAAAGGCTGTTGGGCTGTTCAGCTTGTTTAGGTACTCAACAAAGTGGGATTGGATGCTTGTGTTTGTGGGGTGTTTAGGGGCCCTCATAAATGGAGGATCACTTCCATGGTACTCATATCTTTTTGGAGACTTGGTCAACAAGATTTCAGAAGCAGACAAGGACAAAAAACAGATGATGAAGGATGTAGAGAAGATATGCCTATTTATGACGGGGCTAGCTGCTGTTGTGGTGGTTGGAGCATATCTGCAGATCACATGTTGGAGGTTAGTGGGGGCAAGATCTGCACAAAGAATCAGAACTCAGTATCTAAGAGCAGTTCTTAGACAAGACATCACTTTCTTTGACACAGATATCAACACAGGTGATATTATGCATGGAATTGCAAGCGATGTTGCACAGATTCAAGAAGTTATGGGAGAGAAGATGGCCCACTTCATTCATCACATATTTACATTCATATGTGGATACGCAGTTGGGTTTAAAAGATCATGGAAAGTCTCTCTTGTGGTATTCTCAGTCACTCCATTGACAATGTTCTGTGGCATGGCTTACAAAGCACTTTATGGTGGCCTAACAGCAAAAGAGGAAGCTTCTTATAGGAAAGCTGGTAGCATTGCGGAGCAGGCCATACGTTCAATAAGGACAGTGTTTTCATTTGTTGCAGAAAACCAATTAGCTGGAAAATATGATGAACTACTGCAGCAATCAGCTCCATTAGGGGCAAAAGTTGGTTTTGCTAAAGGTATAGGCATGGGTGTGATCTACTTGATAACCTATTCAACATGGGCACTGGCATTCTGGTATGGTTCAGTATTAATTGCCAAGAATGAACTTGATGGAGGTTCAGCTATTGCTTGTTTCTTTGGTGTCAATGTTGGGGGAAGAGGATTGGCACTGGCACTTTCATATTTTGCACAGTTTGCACAAGGGACTGTTGCAGCAAGCCGTGTATTCTATGTTATTGAGAGAATCCCTGAGATTGATCCCTACAGCCCTGAGGGTAGGAAGCTTTCTGGTGTTCGTGGAAGGATTGAGTTAAAAAGTGTTAGTTTTGCATATCCATCACGTCCTGATTCTCTGATACTTCATTCCCTTAATTTGATATTACCATCTTCAAAAACTGTGGCATTAGTTGGTGCCAGTGGTGGGGGAAAGTCCACCATATTTGCTCTCATAGAGAGGTTTTATGACCCTACTGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACATTGCAAGTAAAGTGGCTACGTGAACAGATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCCACATCTATACTGGAAAACGTGATGATGGGGAGAGATAATGCCACAAAGGAAGAGGCAATTGCTGCTTGTATTGCTGCTGATGCTCATAGCTTCATCTCTAGCCTACCACTAAGCTATGACACTCAGGTGGGAGATAGGGGTACAAAGCTCTCCGGAGGTCAAAAGCAGAGAATTGCACTGGCTCGAGCAATGATCAAAGATCCTAAAATCCTTCTTCTAGATGAACCTACTAGTGCTCTCGATGCCGAGTCAGAGTCTGCGGTCCAACGGGCAATTGACAAGATTTCTGCTGGCCGAACAACCATTGTGATTGCTCACAGAATAGCAACAGTGAAGAATGCTCATACAATTGTGGTTCTTGAACATGGTTCTGTCACTGAGATTGGTGACCATCGACAGCTGTTATCAAAAGCAGGAGCATACCACAACCTTGTCAAGCTTGCTACGGAAGCCATTTCAAAACCTCTAGCTATAGAGAATGGCATACAAAAAGGCAATGATTTATCCATCTATGATAAATCTGCTGCTGCTTTATCAGGATCAAGATATCTAGTTGATATCCCTGGGCCTAAAGACTTAATATCTATACATGAGGAGGAGAAACAGGAAGACAGGGAAGTTCATGACAAAATAAAGGCAAAAAGTTACAGACTTTCTGAAGTATGGAAACTGCAAAAGCCTGAGCTTGTGATGCTATTTTCAGGACTTATTCTGGGAATGTTTGCTGGTGCTATTCTGTCCCTTTTCCCATTGATTTTAGGCATATCCTTGGAAGTATATTTTGGCGATGACACTTCTAAGATGAAAAGAGATGTTTCACACCTTTGTTTAACACTTGTTGGCCTTGGATTTGGTTGCATACTTTCCATGACAGGACAACAAGGTTTCTGTGGTTGGGCTGGATCAAAGCTGACACAAAGAGTTAGAGACATCTTGTTTCAATCCATACTGAAACAAGAACCTGGGTGGTTTGACTTTGAAGAAAATTCTACGGGAGTGTTGGTATCAAGGCTCTCATCCGACTGTGTTAGTTTTCGATCAGTACTTGGAGACAGATTCTCTGTTCTTCTTATGGGGTTGAGTTCAGCTGCTGTTGGCGTTGGTGTGTCCTTTGCCTTCAACTGGAGACTAACACTTGTGGCAGCTGCTGTAACTCCTTTTGCACTTGGTGCAAGCTACATAAACTTGATCATAAACATTGGGCCGCGAGTAGACAATGACTCTTATGCCAAAGCTAGTAACATTGCTTCTGGTGCAGTGTCCAACATAAGGACAGTTACCACATTTTCTGCCCAGGAACAGATAGTTAAGTCCTTTGATAGAGCCCTATCAGAACCTAGAAAAAAATCATTACGAAGTTCACAACTTCAAGGTTTTGTGTTTGGGTTGTTTCAAGGTTCCATGTATGGAGCATACACCTTAACACTTTGGTTTGGCTCATACCTTGTAGAACATGACAAGGCAAAACTTGGAGACGTGTTTAAGATCTTTCTCATTCTTGTTCTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTGGCACCAGATACTTCTATGGCGGCTACAGCAATTCCTGCAGTTCAAGATATCATAAAACGCAGGCCTCTGATTAACAATGATAGAAAAAAAGTTAGGAAAGTAGACAAATCAAAGCCATTCAACATAGAATTCAAGATGGTGACATTTGCATACCCATCTAGAACAGAAGTGACTGTGTTGAAGGACTTTTGTTTGAAGGTCAAAGGTGGAAGCACAGTCGCCCTGGTGGGACCAAGTGGATCAGGGAAGTCAACGGTCATATGGTTGACTCAGAGGTTCTATGATCCTGACCAAGGAAAGGTGATGCTGAGTGGGGTAGATTTGAGGGAGATTGATGTGAAGTGGTTGAGGAGGCAAATGGCTTTGGTGGGTCAAGAACCTACACTTTTTGCTGGGAGCATAAGGGAGAATATTGCATTTGGGGACCCAAATGCTTCATGGACTGAAATTGAAGAGGCTGCAAAGGAGGCTTACATCCACAAGTTCATCAGTGGCCTACCTCAGGGTTATGAGACACAGGTTGGTGAAAGTGGGGTCCAGTTATCAGGTGGCCAGAAACAACGAATTGCTATAGCAAGGGCCATATTGAAGAGATCGAGGGTACTTTTGCTTGATGAAGCAAGCAGTGCCTTGGACTTGGAATCAGAGAAGCACGTCCAAGAAGCCCTTAAAAATGTTGGCAAAGAGGCAACAACCATAATAGTTGCTCACCGTCTTTCCACAATCAGAGAAGCTGGTAAGATCGCAGTTATGAGAGACGGGGAAGTGGTGGAGTATGGGAGCCATGACACTCTCATGGCTTCAACTCAAAATGGCTTGTATGCTAGCCTAGTTCGAGCTGAGACTGAAGCCAATGCCTTTTCTTGA 4482 0.436 MADSFSFEGDSFSSHQRRYHPTPVSYHSVSGSFIPSSFHSDATSTTRRARPNRVPATPFASDDDHSWQEEVSWKFEATGWHHYSTNFGSLLTPWPASSPSDHSRTFRQSANDFYLSRTSRFRGLPSSSYEHSTHGRVELKSYVARDNDHSYFDQRSEPHGLSKSGQSSRKGKSSPLAGEDELSMINYSITEEHLNSPNGNGHGLESPYFKNGHGLPSHDGSHLYGSGGGYSYPHHDIEKYSGYDEEGEEDMDEEDASPPKAVGLFSLFRYSTKWDWMLVFVGCLGALINGGSLPWYSYLFGDLVNKISEADKDKKQMMKDVEKICLFMTGLAAVVVVGAYLQITCWRLVGARSAQRIRTQYLRAVLRQDITFFDTDINTGDIMHGIASDVAQIQEVMGEKMAHFIHHIFTFICGYAVGFKRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAIRSIRTVFSFVAENQLAGKYDELLQQSAPLGAKVGFAKGIGMGVIYLITYSTWALAFWYGSVLIAKNELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYVIERIPEIDPYSPEGRKLSGVRGRIELKSVSFAYPSRPDSLILHSLNLILPSSKTVALVGASGGGKSTIFALIERFYDPTEGIITLDGHDLRTLQVKWLREQIGMVGQEPILFATSILENVMMGRDNATKEEAIAACIAADAHSFISSLPLSYDTQVGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNAHTIVVLEHGSVTEIGDHRQLLSKAGAYHNLVKLATEAISKPLAIENGIQKGNDLSIYDKSAAALSGSRYLVDIPGPKDLISIHEEEKQEDREVHDKIKAKSYRLSEVWKLQKPELVMLFSGLILGMFAGAILSLFPLILGISLEVYFGDDTSKMKRDVSHLCLTLVGLGFGCILSMTGQQGFCGWAGSKLTQRVRDILFQSILKQEPGWFDFEENSTGVLVSRLSSDCVSFRSVLGDRFSVLLMGLSSAAVGVGVSFAFNWRLTLVAAAVTPFALGASYINLIINIGPRVDNDSYAKASNIASGAVSNIRTVTTFSAQEQIVKSFDRALSEPRKKSLRSSQLQGFVFGLFQGSMYGAYTLTLWFGSYLVEHDKAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVQDIIKRRPLINNDRKKVRKVDKSKPFNIEFKMVTFAYPSRTEVTVLKDFCLKVKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVMLSGVDLREIDVKWLRRQMALVGQEPTLFAGSIRENIAFGDPNASWTEIEEAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKRSRVLLLDEASSALDLESEKHVQEALKNVGKEATTIIVAHRLSTIREAGKIAVMRDGEVVEYGSHDTLMASTQNGLYASLVRAETEANAFS* 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01650 1493 Coils Coil 1482 1493 - -
Phac10g01650 1493 ProSitePatterns ABC transporters family signature. 1386 1400 IPR017871 GO:0005524|GO:0016887
Phac10g01650 1493 Pfam ABC transporter 621 770 IPR003439 GO:0005524
Phac10g01650 1493 SUPERFAMILY ABC transporter transmembrane region 267 588 IPR036640 GO:0005524|GO:0016020
Phac10g01650 1493 MobiDBLite consensus disorder prediction 157 173 - -
Phac10g01650 1493 MobiDBLite consensus disorder prediction 150 179 - -
Phac10g01650 1493 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Phac10g01650 1493 MobiDBLite consensus disorder prediction 192 211 - -
Phac10g01650 1493 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1098 1238 - -
Phac10g01650 1493 PANTHER ABC TRANSPORTER B FAMILY 242 839 IPR039421 -
Phac10g01650 1493 FunFam ABC transporter B family member 19 266 598 - -
Phac10g01650 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1247 1483 IPR003439 GO:0005524
Phac10g01650 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1484 IPR027417 -
Phac10g01650 1493 FunFam ABC transporter B family member 1 593 841 - -
Phac10g01650 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01650 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 839 IPR027417 -
Phac10g01650 1493 Gene3D ABC transporter type 1, transmembrane domain 266 844 IPR036640 GO:0005524|GO:0016020
Phac10g01650 1493 FunFam ABC transporter B family member 1 1237 1487 - -
Phac10g01650 1493 Gene3D ABC transporter type 1, transmembrane domain 1097 1243 IPR036640 GO:0005524|GO:0016020
Phac10g01650 1493 Gene3D ABC transporter type 1, transmembrane domain 881 1090 IPR036640 GO:0005524|GO:0016020
Phac10g01650 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 280 568 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01650 1493 Pfam ABC transporter transmembrane region 926 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01650 1493 Pfam ABC transporter transmembrane region 279 550 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01650 1493 Gene3D - 1245 1487 IPR027417 -
Phac10g01650 1493 CDD ABC_MTABC3_MDL1_MDL2 603 840 - -
Phac10g01650 1493 CDD ABC_6TM_Pgp_ABCB1_D2_like 914 1229 - -
Phac10g01650 1493 CDD ABC_6TM_Pgp_ABCB1_D1_like 280 576 - -
Phac10g01650 1493 SMART AAA_5 1274 1460 IPR003593 GO:0016887
Phac10g01650 1493 SMART AAA_5 630 831 IPR003593 GO:0016887
Phac10g01650 1493 CDD ABC_MTABC3_MDL1_MDL2 1247 1485 - -
Phac10g01650 1493 Gene3D - 593 841 IPR027417 -
Phac10g01650 1493 MobiDBLite consensus disorder prediction 39 62 - -
Phac10g01650 1493 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Phac10g01650 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 603 839 IPR003439 GO:0005524
Phac10g01650 1493 SUPERFAMILY ABC transporter transmembrane region 912 1227 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01650 Phac-Chr10 39500724 39509116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01650 880 1490 Calmodulin-binding Proteins AT2G36910 36.364 5.85e-105 363