Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01617 ATGGAGAATCGGAAGACATCGGCGTACTACGAGAACAGAGCGGTGCAGTTCGGCGTAGTCAGCACCGAGTGGCTCGCTCAGGCTCAGTCCGCCACCGTCCACCGCCCCCCTTCTCCTCCTCTTCCTCCTCCCCATAATGACGCCGCCGACAAACCCTTCTCCGTCATCCACGAGTTCGACACCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATCCGCTCCAGCAAGGCCACCACCATGATGCAGCTCGAAATCGAACTCAAAAGCGCCTCCGATTCCCTCAAATGTTGGGATACAACCTCTATCTCCTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTGACCAGGACCTCCGCTCTCGAATACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGTCACTCACTCACTCTTTCTCTCTCTCTCTCTCTCGCATCGTCACTCTCTCATTCGATTCCTTTTTCAGGCTCGCGAAATCATTGCAATGCTGAGCCAGGATTTTGTATTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTGCTTCAGATTCTCAAACTCGCCGCACAGAACAACAAGCTCTTTAGAGTCTTCTGCACAGAGGGGAGACCGGATAGAACGGGTTTGAGGTTGTCCAATGAGCTGGCGAAGCTTGATGTGCCTGTGAAGCTTGTTATAGACTCTGCAGTGGCGTATACTATGGATGAGGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAAATTGCAATGGTCGCTAAGAGCATGAACAAGCCGGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGATTTTACCCTCTGGACCAAAAGGATTTGGCCCCTGCCTTACGCCCTGTTGATTTTGGGGTGCCTGTTCCATCCAAGGTTGAGGTTGAATGTTCAGCGCGGGATTATACTCCTCCTCAGTATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATATTTGTAG 1128 0.5177 MENRKTSAYYENRAVQFGVVSTEWLAQAQSATVHRPPSPPLPPPHNDAADKPFSVIHEFDTWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIELKSASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKVTHSLFLSLSLSHRHSLIRFLFQAREIIAMLSQDFVFDGCTILVHGFSRVVLQILKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPVPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01617 375 FunFam Translation initiation factor eIF-2B subunit alpha 179 375 - -
Phac10g01617 375 Gene3D - 179 375 IPR042529 -
Phac10g01617 375 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 375 - -
Phac10g01617 375 SUPERFAMILY NagB/RpiA/CoA transferase-like 67 374 IPR037171 -
Phac10g01617 375 Gene3D - 52 153 IPR042528 -
Phac10g01617 375 FunFam Translation initiation factor eIF-2B subunit alpha 51 153 - -
Phac10g01617 375 Pfam Initiation factor 2 subunit family 66 363 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01617 Phac-Chr10 39223529 39225955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01617 7 375 Eukaryotic Initiation Factors Gene Family AT1G53880 75.339 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01617 K03239 - gmx:102669842 607.06