Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01609 ATGACTAACCCAAAACTTCCATACGCCGGAATCGGAGATTCCGGCGATTCCGGCGACCACATTTCCCTCTCTAAAAAAACCTACAACAACAAGAAGAAGCTTTTCCTCACACTCTTCGCCACCCTCCTGGTGGCGGCCTCCGTCGTGGCCATCGTCGCCGGAGTAAAAAACAAAAACCAAAAGTCCGACAGCAGCAGCAGCACCCCTCTCACCCTCTCCCACCAGTCCCACGAGATAATCAAGAGCGCGTGCAGCTCCACATTCTACTCAGAGCTCTGCTTCTCCGCAGTGGCTTCAGAACCCAACGTCACCCACAAAGTAACCTCTCACCGTGACGTCATCCAACTCTCCCTGAAGATCACCACGCGCGCGGTGGAGCACAACTACTTCACCGTCAAGAAGCTCTCCGCCAAAGGCGGCCTTACGAAGCGCGAGAAAACGGCGCTCCACGATTGCCTCGAAACCATCGACGAGACGCTCGACGAGCTGAGAGAGGCTCAGCACGATCTCGAGCTCTACCCTAACAAGAAAACTCTGTACCAGCACGCCGACGACCTCAAAACCCTCATCAGCGCCGCCATAACCAACCAGGTCACGTGCCTCGACGGCTTCTCGCACGAGGACGCCGATAAGCGCGTCCGGAAGGCTCTGGAAGAAGGGCAGGTGCACGTGGAACGCATGTGCAGCAACGCACTCGCCATGACCAAGAACATGACCGACACCGACATTGCCAACTTCGAACAGACCACGAAGCTCCGAGACAACAACGTTGGCCAGAATAGAAAGCTCTTGGCGGAGGAGAGCAATGGCAATGGTGACGGTATTGTCTGGCCGGAGTGGATTTCTGGTGCCGACAGGAGGCTGCTTCAGGCCGCGGCGGTGAATGCTGATGTGGTGGTGGCGGCGGACGGTAGTGGAGACTTCAAGACGGTGTCGGAGGCCGTGGAAGCCGCTCCGTTGAAGAGTAGTAAGAGGTTTGTTATTAGGATAAAGGCTGGAGTTTACAGAGAGAATGTGGAAGTTCCTAAGAAGAAGACTAACATCATGTTCTTGGGTGATGGAAGAACAAGCACCATCATCACCGCCAGTAGAAATGTCGTTGATGGTAGCACCACCTTCCACTCCGCCACCGTCGCTGTGGTGGGTGGAAACTTCCTAGCCAGGGACATAACATTCCAAAACACTGCAGGGGCCTCAAAGCACCAAGCAGTGGCCCTAAGAGTAGGAGGGGACCTCTCAGCATTCTACAACTGTGGCATCTTCGCGTACCAAGACACCCTTTATGTCCACAACAACCGTCAATTCTTTGTGAATTGCCTGATTGCAGGAACAGTGGATTTCATCTTTGGAAACTCGGCAGTGGTGTTCCAAGACTGTGACATCCACGCGAGGCGTCCTGACTCGGGGCAGAAGAACATGGTGACGGCCCAAGGAAGAGTAGACCCTAACCAGAACACCGGCATTGTGATCCAGAAGTGCAGGATTGGTGCCACTTCGGACTTGGAGGCCGTGAAGAATAGTTTCAAGACCTATCTTGGGAGGCCATGGAAGGAGTACTCGAGGACTGTGATCATGCAGAGTAGTATCAGTGATGTGATTGACCCTGTTGGGTGGCATGAGTGGAGTGGCAACTTTGCATTGAGCACTTTGGTCTATAGGGAGTATCAGAACACTGGGCCTGGTGCTGGAACCTCCGGTAGGGTATCTTGGAAAGGGTTCCAGGTCATCACTGATGCTGCTGAGGCCCGGGCTTTTACCCCCGGAAGCTTCATTGGGGGCTCCAGCTGGTTGGGCTCTACAGGCTTTCCTTTCTCTCTTGGGTTGTAA 1827 0.5424 MTNPKLPYAGIGDSGDSGDHISLSKKTYNNKKKLFLTLFATLLVAASVVAIVAGVKNKNQKSDSSSSTPLTLSHQSHEIIKSACSSTFYSELCFSAVASEPNVTHKVTSHRDVIQLSLKITTRAVEHNYFTVKKLSAKGGLTKREKTALHDCLETIDETLDELREAQHDLELYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHEDADKRVRKALEEGQVHVERMCSNALAMTKNMTDTDIANFEQTTKLRDNNVGQNRKLLAEESNGNGDGIVWPEWISGADRRLLQAAAVNADVVVAADGSGDFKTVSEAVEAAPLKSSKRFVIRIKAGVYRENVEVPKKKTNIMFLGDGRTSTIITASRNVVDGSTTFHSATVAVVGGNFLARDITFQNTAGASKHQAVALRVGGDLSAFYNCGIFAYQDTLYVHNNRQFFVNCLIAGTVDFIFGNSAVVFQDCDIHARRPDSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATSDLEAVKNSFKTYLGRPWKEYSRTVIMQSSISDVIDPVGWHEWSGNFALSTLVYREYQNTGPGAGTSGRVSWKGFQVITDAAEARAFTPGSFIGGSSWLGSTGFPFSLGL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01609 608 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 239 IPR035513 -
Phac10g01609 608 Coils Coil 149 169 - -
Phac10g01609 608 SMART PMEI_2 75 234 IPR006501 GO:0004857
Phac10g01609 608 Pfam Plant invertase/pectin methylesterase inhibitor 79 234 IPR006501 GO:0004857
Phac10g01609 608 NCBIfam pectinesterase inhibitor domain 69 238 IPR006501 GO:0004857
Phac10g01609 608 SUPERFAMILY Pectin lyase-like 292 607 IPR011050 -
Phac10g01609 608 CDD PMEI-like_3 82 239 - -
Phac10g01609 608 PANTHER PECTINESTERASE 47 598 - -
Phac10g01609 608 ProSitePatterns Pectinesterase signature 1. 322 341 IPR018040 -
Phac10g01609 608 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 239 IPR035513 -
Phac10g01609 608 Gene3D - 291 608 IPR012334 -
Phac10g01609 608 Pfam Pectinesterase 297 593 IPR000070 GO:0030599|GO:0042545
Phac10g01609 608 FunFam Pectinesterase 76 239 - -
Phac10g01609 608 FunFam Pectinesterase 291 608 - -
Phac10g01609 608 ProSitePatterns Pectinesterase signature 2. 441 450 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01609 Phac-Chr10 39157346 39162305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01609 30 608 Carbohydrate Esterase AT3G14310 70.169 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01609 K01051 - pvu:PHAVU_010G123100g 1097.03