Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01600 ATGAATACCATTCTCACCTTCCTCACAGCCATTGCTTTTTTTGTGGCTCAATCATTGCAAAACTACATCATCCAGAGGCTGCACAAAATCTGCAAGCATTGGGGATGTGCTGATGCAGTGAAGGAAAAAGGAGATCATGAAATGGATTATTGTTCAGTGTGTCTAAGCCAAATTTGTGAGGGGGAAAAGGTTTGGTCTCTACCAGTATGCAATCACAGGTACCATGCTGATTGTATTGGTGCTTGGCTTAAGAACCATACCACATGCCCTCTTTGCAGAAACAAAATCACTGATCATTTCGTCCAAAAGCACAGACAGGTGAAGAGCTTGGGAGAATCTATGTTCAATCTCATACAGAGTTTCTCAGATCTATTGGTATCTGTTCTCTACATGGTACTTCCATCCAGCATCACTGAGAGTTTCCCTTTGGTTCATTGA 438 0.4201 MNTILTFLTAIAFFVAQSLQNYIIQRLHKICKHWGCADAVKEKGDHEMDYCSVCLSQICEGEKVWSLPVCNHRYHADCIGAWLKNHTTCPLCRNKITDHFVQKHRQVKSLGESMFNLIQSFSDLLVSVLYMVLPSSITESFPLVH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01600 145 ProSiteProfiles Zinc finger RING-type profile. 51 93 IPR001841 -
Phac10g01600 145 Pfam Ring finger domain 50 93 IPR001841 -
Phac10g01600 145 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 97 IPR044675 -
Phac10g01600 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 109 IPR013083 -
Phac10g01600 145 SMART ring_2 51 92 IPR001841 -
Phac10g01600 145 SUPERFAMILY RING/U-box 50 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01600 51 96 C3H Transcription Factor Family AT1G53820 54.348 5.81e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01600 - - gmx:100500375 233.802