Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01596 ATGGTGTTGGATCCAAGGCTGGTGCTGGTAGTGTTCATCAGCACTTGCATTTTGGCCATCAATGGCGGTGAAACAGATCCAAATGACGTTGCTTCTCTGAAGGTTATGTTTCAAAGTATGAACTCACCACCCCAGCTAAATTGGAATGGGGATGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAATCACAGAGATTAAGTTACCTGGTCGTTCACTTTCCGGATCTTTGGGTTACCAGCTAGAATCCTTGTCATCGGTTACAAACCTAGACTTGAGTAACAATAATCTTGGTGGCACCATACCATACCAACTTCCTCCTAATCTACAGTACTTAAATCTTGCCAATAATAATTTCAATGGGGAAGTCCCTTATTCTCTTTCTCAGAAGACTTCGCTTGTAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCATTCAATTCTTTGACTGGTGACCTGCCTCAGACTCTGAGCTCACTTTCCAGCATAAGCACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTCCTTGCTAATCTGCCTCTGGAAACTCTGAATGTGGGAAATAATCATTTTACTGGCTGGATACCAGAACAATTGAATAACATAAACCTGCAAAAGGATGGTAATGATTGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTAACAAGAAATCGAAATCACAGATCTGGTGGACAGACCCCATCAGATGCTGGCTCAAGCAACGATGGAGGCAAAAAATCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGTCATTTAGTGATATTGAAAAGCTTGACAATCAGCCCTTGGCTCCTCATACTTCACATCATCATGAAGTGAATTCAATGCAAACCTCATCTGTAATTGACTTGAATACATTTGATACACCTGCGGCCCCAATAAGTCTTAAACCTCCACCTATTGATCGTCATAAATCATTTGACGAGGATGAGTTTTCAAAGAAGCCCACTACAGTCATTAAGCCCACTACAGTAAAGAAGGCCGTCACAGTTCCTACAAATGTAAAATCTTATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTGTATCGGGCTCAATTTGATGATGGAAAGGTTCTTGCTGTCAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGAAGATTTTCTGGAACTGGTTTCAAGCATATCCAATTTGCACCATCCCAATGTGACAGAGCTTGCAGGTTATTGTTCAGAGCATGGACAACACCTACTAGTCTATGAGTTTCATCAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTATAGTAAACCATTGATATGGAATTCACGTGTGAAGATTGCTTTGGGGATTGCACGGGCTTTAGAGTACCTCCATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCAGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAATCAGGTATTGAACAATAATTCTGGATCTGGATATGAAGCTCCCGAAGTTGGCATGTCTGGCCAATACACTCTTAAGAGTGATGTCTTTAGCTTTGGAGTTATCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGGGTTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTCTGGCGAAAATGGTTGATCCTGCATTAGAAGGACTATACCCTGTGAAGTCTCTTTCTCGATTTGCAGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCGGAGTTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGTAAGAGGACGACGTTTGGAACTGATCAAGGAGGATCCAACCGAGGGGGAGATAACCAAGAATCACAAGACATGTAA 2157 0.4312 MVLDPRLVLVVFISTCILAINGGETDPNDVASLKVMFQSMNSPPQLNWNGDDPCGQSWQGITCSGNRITEIKLPGRSLSGSLGYQLESLSSVTNLDLSNNNLGGTIPYQLPPNLQYLNLANNNFNGEVPYSLSQKTSLVVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTINVLANLPLETLNVGNNHFTGWIPEQLNNINLQKDGNDWSSGPAPPPPPGTPPVVTRNRNHRSGGQTPSDAGSSNDGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKKRSKKSFSDIEKLDNQPLAPHTSHHHEVNSMQTSSVIDLNTFDTPAAPISLKPPPIDRHKSFDEDEFSKKPTTVIKPTTVKKAVTVPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEDFLELVSSISNLHHPNVTELAGYCSEHGQHLLVYEFHQNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDSGLASYIPNANQVLNNNSGSGYEAPEVGMSGQYTLKSDVFSFGVIMLELLSGRKPFDSSRPRSEQGLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTTFGTDQGGSNRGGDNQESQDM* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01596 718 SUPERFAMILY L domain-like 45 228 - -
Phac10g01596 718 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Phac10g01596 718 MobiDBLite consensus disorder prediction 695 718 - -
Phac10g01596 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 490 698 - -
Phac10g01596 718 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 70 685 - -
Phac10g01596 718 SUPERFAMILY Protein kinase-like (PK-like) 391 684 IPR011009 -
Phac10g01596 718 PRINTS Leucine-rich repeat signature 159 172 - -
Phac10g01596 718 PRINTS Leucine-rich repeat signature 92 105 - -
Phac10g01596 718 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Phac10g01596 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 249 - -
Phac10g01596 718 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Phac10g01596 718 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Phac10g01596 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 489 - -
Phac10g01596 718 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515
Phac10g01596 718 MobiDBLite consensus disorder prediction 255 275 - -
Phac10g01596 718 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01596 718 MobiDBLite consensus disorder prediction 232 278 - -
Phac10g01596 718 CDD STKc_IRAK 418 687 - -
Phac10g01596 718 Gene3D Ribonuclease Inhibitor 26 242 IPR032675 -
Phac10g01596 718 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01596 Phac-Chr10 39057535 39065890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01596 8 717 Strubbelig Receptor Gene Family AT1G53730 64.148 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac10g01596 PK_Tyr_Ser-Thr 9.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01596 - - gmx:100780323 1217.99