Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01595 ATGTTTCAAAGTATGAACTCACCACCCCAGCTAAATTGGAATGGGGATGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAATCACAGAGATTAAGTTACCTGGTCGTTCACTTTCCGGATCTTTGGGTTACCAGCTAGAATCCTTGTCATCGGTTACAAACCTAGACTTGAGTAACAATAATCTTGGTGGCACCATACCATACCAACTTCCTCCTAATCTACAGTACTTAAATCTTGCCAATAATAATTTCAATGGGGAAGTCCCTTATTCTCTTTCTCAGAAGACTTCGCTTGTAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCATTCAATTCTTTGACTGGTGACCTGCCTCAGACTCTGAGCTCACTTTCCAGCATAAGCACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTCCTTGCTAATCTGCCTCTGGAAACTCTGAATGTGGGAAATAATCATTTTACTGGCTGGATACCAGAACAATTGAATAACATAAACCTGCAAAAGGATGGTAATGATTGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTAACAAGAAATCGAAATCACAGATCTGGTGGACAGACCCCATCAGATGCTGGCTCAAGCAACGATGGAGGCAAAAAATCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGTCATTTAGTGATATTGAAAAGCTTGACAATCAGCCCTTGGCTCCTCATACTTCACATCATCATGAAGTGAATTCAATGCAAACCTCATCTGTAATTGACTTGAATACATTTGATACACCTGCGGCCCCAATAAGTCTTAAACCTCCACCTATTGATCGTCATAAATCATTTGACGAGGATGAGTTTTCAAAGAAGCCCACTACAGTCATTAAGCCCACTACAGTAAAGAAGGCCGTCACAGTTCCTACAAATGTAAAATCTTATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTGTATCGGGCTCAATTTGATGATGGAAAGGTTCTTGCTGTCAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGAAGATTTTCTGGAACTGGTTTCAAGCATATCCAATTTGCACCATCCCAATGTGACAGAGCTTGCAGGTTATTGTTCAGAGCATGGACAACACCTACTAGTCTATGAGTTTCATCAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTATAGTAAACCATTGATATGGAATTCACGTGTGAAGATTGCTTTGGGGATTGCACGGGCTTTAGAGTACCTCCATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCAGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAATCAGGTATTGAACAATAATTCTGGATCTGGATATGAAGCTCCCGAAGTTGGCATGTCTGGCCAATACACTCTTAAGAGTGATGTCTTTAGCTTTGGAGTTATCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGGGTTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTCTGGCGAAAATGGTTGATCCTGCATTAGAAGGACTATACCCTGTGAAGTCTCTTTCTCGATTTGCAGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCGGAGTTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGTAAGAGGACGACGTTTGGAACTGATCAAGGAGGATCCAACCGAGGGGGAGATAACCAAGAATCACAAGACATGTAA 2052 0.4288 MFQSMNSPPQLNWNGDDPCGQSWQGITCSGNRITEIKLPGRSLSGSLGYQLESLSSVTNLDLSNNNLGGTIPYQLPPNLQYLNLANNNFNGEVPYSLSQKTSLVVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTINVLANLPLETLNVGNNHFTGWIPEQLNNINLQKDGNDWSSGPAPPPPPGTPPVVTRNRNHRSGGQTPSDAGSSNDGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKKRSKKSFSDIEKLDNQPLAPHTSHHHEVNSMQTSSVIDLNTFDTPAAPISLKPPPIDRHKSFDEDEFSKKPTTVIKPTTVKKAVTVPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEDFLELVSSISNLHHPNVTELAGYCSEHGQHLLVYEFHQNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDSGLASYIPNANQVLNNNSGSGYEAPEVGMSGQYTLKSDVFSFGVIMLELLSGRKPFDSSRPRSEQGLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTTFGTDQGGSNRGGDNQESQDM* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01595 683 SUPERFAMILY L domain-like 11 193 - -
Phac10g01595 683 MobiDBLite consensus disorder prediction 197 243 - -
Phac10g01595 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 455 663 - -
Phac10g01595 683 Gene3D Transferase(Phosphotransferase) domain 1 456 670 - -
Phac10g01595 683 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Phac10g01595 683 ProSitePatterns Protein kinases ATP-binding region signature. 383 406 IPR017441 GO:0005524
Phac10g01595 683 PRINTS Leucine-rich repeat signature 124 137 - -
Phac10g01595 683 PRINTS Leucine-rich repeat signature 57 70 - -
Phac10g01595 683 Gene3D Phosphorylase Kinase; domain 1 339 454 - -
Phac10g01595 683 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 342 454 - -
Phac10g01595 683 Gene3D Ribonuclease Inhibitor 2 101 IPR032675 -
Phac10g01595 683 ProSiteProfiles Protein kinase domain profile. 377 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01595 683 MobiDBLite consensus disorder prediction 660 683 - -
Phac10g01595 683 CDD STKc_IRAK 383 652 - -
Phac10g01595 683 MobiDBLite consensus disorder prediction 220 240 - -
Phac10g01595 683 Pfam Protein tyrosine and serine/threonine kinase 379 649 IPR001245 GO:0004672|GO:0006468
Phac10g01595 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 1 214 - -
Phac10g01595 683 Gene3D Ribonuclease Inhibitor 102 199 IPR032675 -
Phac10g01595 683 SUPERFAMILY Protein kinase-like (PK-like) 356 649 IPR011009 -
Phac10g01595 683 PANTHER LEUCINE RICH REPEAT KINASE 2 31 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01595 Phac-Chr10 39057535 39065890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01595 1 682 Strubbelig Receptor Gene Family AT1G53730 65.948 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac10g01595 PK_Tyr_Ser-Thr 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01595 - - gmx:100780323 1162.13