Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01594 ATGTTTGATGCAGTTGCTTCTCTGAAGGTTATGTTTCAAAGTATGAACTCACCACCCCAGCTAAATTGGAATGGGGATGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAATCACAGAGATTAAGTTACCTGGTCGTTCACTTTCCGGATCTTTGGGTTACCAGCTAGAATCCTTGTCATCGGTTACAAACCTAGACTTGAGTAACAATAATCTTGGTGGCACCATACCATACCAACTTCCTCCTAATCTACAGTACTTAAATCTTGCCAATAATAATTTCAATGGGGAAGTCCCTTATTCTCTTTCTCAGAAGACTTCGCTTGTAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCATTCAATTCTTTGACTGGTGACCTGCCTCAGACTCTGAGCTCACTTTCCAGCATAAGCACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTCCTTGCTAATCTGCCTCTGGAAACTCTGAATGTGGGAAATAATCATTTTACTGGCTGGATACCAGAACAATTGAATAACATAAACCTGCAAAAGGATGGTAATGATTGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTAACAAGAAATCGAAATCACAGATCTGGTGGACAGACCCCATCAGATGCTGGCTCAAGCAACGATGGAGGCAAAAAATCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGTCATTTAGTGATATTGAAAAGCTTGACAATCAGCCCTTGGCTCCTCATACTTCACATCATCATGAAGTGAATTCAATGCAAACCTCATCTGTAATTGACTTGAATACATTTGATACACCTGCGGCCCCAATAAGTCTTAAACCTCCACCTATTGATCGTCATAAATCATTTGACGAGGATGAGTTTTCAAAGAAGCCCACTACAGTCATTAAGCCCACTACAGTAAAGAAGGCCGTCACAGTTCCTACAAATGTAAAATCTTATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTGTATCGGGCTCAATTTGATGATGGAAAGGTTCTTGCTGTCAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGAAGATTTTCTGGAACTGGTTTCAAGCATATCCAATTTGCACCATCCCAATGTGACAGAGCTTGCAGGTTATTGTTCAGAGCATGGACAACACCTACTAGTCTATGAGTTTCATCAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTATAGTAAACCATTGATATGGAATTCACGTGTGAAGATTGCTTTGGGGATTGCACGGGCTTTAGAGTACCTCCATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCAGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAATCAGGTATTGAACAATAATTCTGGATCTGGATATGAAGCTCCCGAAGTTGGCATGTCTGGCCAATACACTCTTAAGAGTGATGTCTTTAGCTTTGGAGTTATCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGGGTTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTCTGGCGAAAATGGTTGATCCTGCATTAGAAGGACTATACCCTGTGAAGTCTCTTTCTCGATTTGCAGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCGGAGTTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGTAAGAGGACGACGTTTGGAACTGATCAAGGAGGATCCAACCGAGGGGGAGATAACCAAGAATCACAAGACATGTAA 2082 0.4284 MFDAVASLKVMFQSMNSPPQLNWNGDDPCGQSWQGITCSGNRITEIKLPGRSLSGSLGYQLESLSSVTNLDLSNNNLGGTIPYQLPPNLQYLNLANNNFNGEVPYSLSQKTSLVVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTINVLANLPLETLNVGNNHFTGWIPEQLNNINLQKDGNDWSSGPAPPPPPGTPPVVTRNRNHRSGGQTPSDAGSSNDGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKKRSKKSFSDIEKLDNQPLAPHTSHHHEVNSMQTSSVIDLNTFDTPAAPISLKPPPIDRHKSFDEDEFSKKPTTVIKPTTVKKAVTVPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEDFLELVSSISNLHHPNVTELAGYCSEHGQHLLVYEFHQNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDSGLASYIPNANQVLNNNSGSGYEAPEVGMSGQYTLKSDVFSFGVIMLELLSGRKPFDSSRPRSEQGLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTTFGTDQGGSNRGGDNQESQDM* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01594 693 Pfam Leucine Rich Repeat 136 158 IPR001611 GO:0005515
Phac10g01594 693 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 352 464 - -
Phac10g01594 693 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Phac10g01594 693 SUPERFAMILY L domain-like 21 203 - -
Phac10g01594 693 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 465 673 - -
Phac10g01594 693 ProSiteProfiles Protein kinase domain profile. 387 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01594 693 PRINTS Leucine-rich repeat signature 134 147 - -
Phac10g01594 693 PRINTS Leucine-rich repeat signature 67 80 - -
Phac10g01594 693 SUPERFAMILY Protein kinase-like (PK-like) 366 659 IPR011009 -
Phac10g01594 693 MobiDBLite consensus disorder prediction 207 253 - -
Phac10g01594 693 Gene3D Ribonuclease Inhibitor 3 217 IPR032675 -
Phac10g01594 693 PANTHER LEUCINE RICH REPEAT KINASE 2 41 667 - -
Phac10g01594 693 Pfam Leucine rich repeat N-terminal domain 6 39 IPR013210 -
Phac10g01594 693 Gene3D Phosphorylase Kinase; domain 1 349 464 - -
Phac10g01594 693 Gene3D Transferase(Phosphotransferase) domain 1 466 680 - -
Phac10g01594 693 CDD STKc_IRAK 393 662 - -
Phac10g01594 693 MobiDBLite consensus disorder prediction 670 693 - -
Phac10g01594 693 MobiDBLite consensus disorder prediction 230 250 - -
Phac10g01594 693 Pfam Protein tyrosine and serine/threonine kinase 389 659 IPR001245 GO:0004672|GO:0006468
Phac10g01594 693 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01594 Phac-Chr10 39057535 39065890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01594 5 692 Strubbelig Receptor Gene Family AT1G53730 65.527 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac10g01594 PK_Tyr_Ser-Thr 8.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01594 - - gmx:100780323 1171.76