Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01593 ATGATGACCACCAACACCAGTGTCAAAAACAACAACGTTGGAGAATTTGGGGACACCACTCTCACCAAGGTTTTTGTTGGGGGCTTAGCATGGGAGACTCCCAAGGATGCCCTTAGGGACCATTTTGAAAAGTATGGTGAGATCCTTGAAGCTGTCATCATTTCTGATAAGCTTACTGCCAAATCCAAAGGCTATGGCTTTGTGACTTTCAAAGAGGCTGAGGCTGCCAAGAAGGCTTGCGAGGACTCTGCAACTCTTGTTATCAATGGCCGTAGAGCCAACTGCAATCTGGCTTTCTTAGGTGCTCGTCGTCCAAGGTCTTCTTCCACTGCTTCACCACCTCCGCAGCCGCAAGGAGGATCAAACAGTGGAGTGGTGAAGAACAATGCAGCAGGGAATCACGTGCAGCCATATTATCATCCACTGAGGACAACTGCTATGCCCTTCCACAATCACCCTCTTCCTTTCTATGGCTACACTCCAACCTACATTGTGACAGACATGAACTACAATTACAACCAGAAACTGAGCTATGGCAACGGTGGGGCATACCTGAATGGGCAGCAGTTGTCCCATGTGTACCCTAGGCAGGGTATTGTGGGTGGCAACACAGTAATGCCAGTGTACCCTCTCTATCAGTATCATCATCCAACGGAGACCATAGGCCTACCAGCACACAACTTTTATCCAACGGCACCCTGGGCCCCATTCACCATCATTTCCAAACCATCTTCTATCATTCCTCATACAGTTGGCACAGGTGAGTGCTTTAAAAGGGTTGTCTGA 786 0.486 MMTTNTSVKNNNVGEFGDTTLTKVFVGGLAWETPKDALRDHFEKYGEILEAVIISDKLTAKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLAFLGARRPRSSSTASPPPQPQGGSNSGVVKNNAAGNHVQPYYHPLRTTAMPFHNHPLPFYGYTPTYIVTDMNYNYNQKLSYGNGGAYLNGQQLSHVYPRQGIVGGNTVMPVYPLYQYHHPTETIGLPAHNFYPTAPWAPFTIISKPSSIIPHTVGTGECFKRVV* 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01593 261 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 22 100 IPR000504 GO:0003723
Phac10g01593 261 MobiDBLite consensus disorder prediction 104 127 - -
Phac10g01593 261 SUPERFAMILY RNA-binding domain, RBD 18 121 IPR035979 GO:0003676
Phac10g01593 261 SMART rrm1_1 23 96 IPR000504 GO:0003723
Phac10g01593 261 Gene3D - 3 112 IPR012677 -
Phac10g01593 261 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 24 91 IPR000504 GO:0003723
Phac10g01593 261 FunFam Putative RNA-binding protein ARP1 16 106 - -
Phac10g01593 261 PANTHER BOULE-RELATED 7 228 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac10g01593 Phac-Chr10 39038537 39041303 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01593 18 163 C2H2 Transcription Factor Family AT2G19380 29.221 2.48e-15 73.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01593 - - vra:106778170 476.863