Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01593 | ATGATGACCACCAACACCAGTGTCAAAAACAACAACGTTGGAGAATTTGGGGACACCACTCTCACCAAGGTTTTTGTTGGGGGCTTAGCATGGGAGACTCCCAAGGATGCCCTTAGGGACCATTTTGAAAAGTATGGTGAGATCCTTGAAGCTGTCATCATTTCTGATAAGCTTACTGCCAAATCCAAAGGCTATGGCTTTGTGACTTTCAAAGAGGCTGAGGCTGCCAAGAAGGCTTGCGAGGACTCTGCAACTCTTGTTATCAATGGCCGTAGAGCCAACTGCAATCTGGCTTTCTTAGGTGCTCGTCGTCCAAGGTCTTCTTCCACTGCTTCACCACCTCCGCAGCCGCAAGGAGGATCAAACAGTGGAGTGGTGAAGAACAATGCAGCAGGGAATCACGTGCAGCCATATTATCATCCACTGAGGACAACTGCTATGCCCTTCCACAATCACCCTCTTCCTTTCTATGGCTACACTCCAACCTACATTGTGACAGACATGAACTACAATTACAACCAGAAACTGAGCTATGGCAACGGTGGGGCATACCTGAATGGGCAGCAGTTGTCCCATGTGTACCCTAGGCAGGGTATTGTGGGTGGCAACACAGTAATGCCAGTGTACCCTCTCTATCAGTATCATCATCCAACGGAGACCATAGGCCTACCAGCACACAACTTTTATCCAACGGCACCCTGGGCCCCATTCACCATCATTTCCAAACCATCTTCTATCATTCCTCATACAGTTGGCACAGGTGAGTGCTTTAAAAGGGTTGTCTGA | 786 | 0.486 | MMTTNTSVKNNNVGEFGDTTLTKVFVGGLAWETPKDALRDHFEKYGEILEAVIISDKLTAKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLAFLGARRPRSSSTASPPPQPQGGSNSGVVKNNAAGNHVQPYYHPLRTTAMPFHNHPLPFYGYTPTYIVTDMNYNYNQKLSYGNGGAYLNGQQLSHVYPRQGIVGGNTVMPVYPLYQYHHPTETIGLPAHNFYPTAPWAPFTIISKPSSIIPHTVGTGECFKRVV* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01593 | 261 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 22 | 100 | IPR000504 | GO:0003723 | |
Phac10g01593 | 261 | MobiDBLite | consensus disorder prediction | 104 | 127 | - | - | |
Phac10g01593 | 261 | SUPERFAMILY | RNA-binding domain, RBD | 18 | 121 | IPR035979 | GO:0003676 | |
Phac10g01593 | 261 | SMART | rrm1_1 | 23 | 96 | IPR000504 | GO:0003723 | |
Phac10g01593 | 261 | Gene3D | - | 3 | 112 | IPR012677 | - | |
Phac10g01593 | 261 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 24 | 91 | IPR000504 | GO:0003723 | |
Phac10g01593 | 261 | FunFam | Putative RNA-binding protein ARP1 | 16 | 106 | - | - | |
Phac10g01593 | 261 | PANTHER | BOULE-RELATED | 7 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01593 | Phac-Chr10 | 39038537 | 39041303 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g01593 | 18 | 163 | C2H2 Transcription Factor Family | AT2G19380 | 29.221 | 2.48e-15 | 73.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01593 | - | - | vra:106778170 | 476.863 |