Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01591 ATGATGACCACCAACACCAGTGTCAAAAACAACAACGTTGGAGAATTTGGGGACACCACTCTCACCAAGGTTTTTGTTGGGGGCTTAGCATGGGAGACTCCCAAGGATGCCCTTAGGGACCATTTTGAAAAGTATGGTGAGATCCTTGAAGCTGTCATCATTTCTGATAAGCTTACTGCCAAATCCAAAGGCTATGGCTTTGTGACTTTCAAAGAGGCTGAGGCTGCCAAGAAGGCTTGCGAGGACTCTGCAACTCTTGTTATCAATGGCCGTAGAGCCAACTGCAATCTGGCTTTCTTAGGTGCTCGTCGTCCAAGGTCTTCTTCCACTGCTTCACCACCTCCGCAGCCGCAAGGAGGATCAAACAGTGGAGTGGTGAAGAACAATGCAGCAGGGAATCACGTGCAGCCATATTATCATCCACTGAGGACAACTGCTATGCCCTTCCACAATCACCCTCTTCCTTTCTATGGCTACACTCCAACCTACATTGTGACAGACATGAACTACAATTACAACCAGAAACTGAGCTATGGCAACGGTGGGGCATACCTGAATGGGCAGCAGTTGTCCCATGTGTACCCTAGGCAGGGTATTGTGGGTGGCAACACAGTAATGCCAGTGTACCCTCTCTATCAGTATCATCATCCAACGGAGACCATAGGCCTACCAGCACACAACTTTTATCCAACGGCACCCTGGGCCCCATTCACCATCATTTCCAAACCATCTTCTATCATTCCTCATACAGGTACAGTTGGCACAGGTGAGTGCTTTAAAAGGGTTGTCTGA 792 0.4861 MMTTNTSVKNNNVGEFGDTTLTKVFVGGLAWETPKDALRDHFEKYGEILEAVIISDKLTAKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLAFLGARRPRSSSTASPPPQPQGGSNSGVVKNNAAGNHVQPYYHPLRTTAMPFHNHPLPFYGYTPTYIVTDMNYNYNQKLSYGNGGAYLNGQQLSHVYPRQGIVGGNTVMPVYPLYQYHHPTETIGLPAHNFYPTAPWAPFTIISKPSSIIPHTGTVGTGECFKRVV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01591 263 Gene3D - 3 112 IPR012677 -
Phac10g01591 263 PANTHER BOULE-RELATED 7 228 - -
Phac10g01591 263 SUPERFAMILY RNA-binding domain, RBD 21 110 IPR035979 GO:0003676
Phac10g01591 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 22 100 IPR000504 GO:0003723
Phac10g01591 263 MobiDBLite consensus disorder prediction 104 127 - -
Phac10g01591 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 24 91 IPR000504 GO:0003723
Phac10g01591 263 SMART rrm1_1 23 96 IPR000504 GO:0003723
Phac10g01591 263 FunFam Putative RNA-binding protein ARP1 16 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01591 Phac-Chr10 39038537 39041303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01591 18 163 C2H2 Transcription Factor Family AT2G19380 29.221 2.77e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01591 - - vra:106778170 486.108