Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01585 ATGGCTTCCTCCTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACCCCAAGTTCAAAAAATGGATCACTCTTGGGAACTGCAAAAGCTTCTTTTCTCAGTGGGAGGAAACTGAAGGTGAACAGTTTCACAGCACCAGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGCTGCTGATCCTGATAGGCCTCTGTGGTTCCCAGGAAGCACTCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGGGATTTTGGGTTTGATCCTCTCGGTCTTTCATCTGATCCTGAGAGCTTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTATACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTCTTCGTAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGATGGGCTGACATCATCAAGCCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGAAGTGGTTCTCCAGAGAAGCTCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCAGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 810 0.5037 MASSCASSAIAAVAISTPSSKNGSLLGTAKASFLSGRKLKVNSFTAPVGARSSTTVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFVVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01585 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Phac10g01585 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 267 IPR001344 GO:0009765|GO:0016020
Phac10g01585 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Phac10g01585 269 SUPERFAMILY Chlorophyll a-b binding protein 60 267 - -
Phac10g01585 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01585 Phac-Chr10 38981371 38984976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01585 45 269 Chloroplast and Mitochondria Gene Families AT3G61470 89.823 1.23e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01585 K08908 - gmx:100784089 535.413