Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01581 ATGGAGGACATAATTTCCATTCTTGATCACTTGCCTGTAGGATTCAGATTCCGTCCCACAGATGAGGAGCTTGTCAATCATTACCTCAAACACAAGTTGCTGGGTGATGATTTCTCTGTTCAGTTCATTCCAGAGATCGACCTTTGCAAAGTGGAACCTTGGGACGTGCCAGCAAAATCAATATTCAAATCCGATGAGCTACAATGGTTTTTCTTCAGTTCTGTGGATTACAAGTACTCCAATAGTAAAAGGGTCAACAGGACAACCGAGCATGGCTTCTGGAAATCCACTGGAAATGACCGTAACATTAAAACTGGTGGCAGTAAAAATGTTATTGGGACAAAAAAGACTCTTGTTTTCCACAAAGGCCGTGTTCCCGGTGGTCAAAGGACCAACTGGGTTATTCATGAATATCATGCTCTTGCCTCCCGTGAAAGCCAGAAGACTTACGTTTTATGCCGCTTAATGAAGAAATTTGAGAAAAAAAATGAAGGGGGAATTGATGCACCAATCTTTAGTGGAGGCGAGCCCAGCACAAGCATGGTTTCTGACTATGGAAATCAGGTACCAGCTGGAGAAATTCCACCTGCAGATATTTTACCTAGAATGATTGTGGATCCAATCTTTCCAGAAGAGATTTTCTTCTCCCCAGTACAACAGCCTCCAGTTGGTATTGAAGTGGAAGGATTTTTCCCAAACTCCCCAACGCGCAATGCTTGTTTTGGAAATGAAAGCATCAATATGCAAATTCCATTTGGAGTTACTGATGATGAAGATGAGTTCCTAAATTCAATACTGGTTGATAATGAAGAGTTTGTTATCAATGAAGAAAGAAGAGACTGTTTTGTCAATTGTTCCACCCAACCAAAGTCATTGAGAAGAGTATACTATGCTAGCAGTGACACAGATGCTGAAGTTGTCTCTAATCTGCATGGCAACATTTGTTCTGGTGAATACTCTGTTCGTGGTGGCATGAGTAGTCTAACTTCAAATCATGAAGCACACAAAGAAAAAAAGGAGAGTATCATTCAAGATGATTTCTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCTGTCGAAACAACAAGATTGGAAAATCGTTATAATCTAAGACCAGACAACTTCATATTACAAAAAACTGTTGCAGGAAGACCTCAAACACAGAAGAAGGTTTCAAACAATGCAGTATCCCACATAGAGGCCCGGAAGGAATTGGTCACTGTGAGATCAGAGAAAGATCAGAAAAGTGCTCAAAATACTAGTTCAAGAGGGATCCTCAAAATCAGAAGCCATCAATCATCTAATGTCAATAGCAAAAGTTCTTTCTTTTACATGGAAACGACTTCATCAAACCAAAACCTGTTTCCACGTTCAGTATATCTTGTCAATGTTGTCATAGGGATTCTGTTGAGTGAACGAAGTTATCAACAACACACAGATACCATAAATCCTCGTTTATCTCTCTCCGATTCAGCGATCTCCTCTTCCATTTTTGTGTTCTTTCTTTGTTTCATTCAAACTACAAACAGAGTTGAGTGTTCATCAAAATCAATGGGTATTGTTGGTGTTGGTTTCCGTCCGACAGAACAAGAACTTGTCGATTTTTACCTCAAACACAAGTTGCTCGCTGATGATTCTCGTGTGCACCTCATCCCTGTCATTGACCTCTGCGATGTGGAACCTTCGGATGTACCAGTGATACTTGCAAGATCACCGATTAGATTTGGTGACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAACAGTAAAAGGGTTAACAGGAAAACCAAGTGTGGCTTCTGGAAAGCCACCGGAAAAGACCGTAACATCAGGAGCGGCGACACCAACACTCTCATTGCCACCAAGAAGACTCTTGTTTACTACAAAGGCAGTGTTTCCTGCGGTGTCAAGTCCAACTGGGTTATTCACGAATATCATGCTGTTACCTTTCATGAAAGCAAGAGGGCTTTTGTTTTATGCCGCTTGATGAGGAAACCTGGGAAAGCAACAGAAGGTGGAGCTGATCCACTAATCTGTGATGAAGGGGAGCCCAGTACACTCAGGGATTCTGACTATGGAAATCAGGCAACAGCAGAAGGGATTCCATCTGAAGGTTCTTTTACAGGAGTTCCACTAATCTGTGATGAAGGGGGGCCCAATAAACTCAAGCTTTCTGACTATGGAAATCAGGCAACAGCAGAAGGAATTTCATCTGAAGGTTCTTTTACTGGAGTGGAAACAATCTTCCTGACTAGGCCTCAGGCAGATACATACTTCTCCCAAAACCAACAGTCTCCAATAGAAGAAGCATATTTTCCAAACTACCCATTTAACAATGCCTATTTTAGAAATGAAAATAACCTTATGCATTATGATTTTAAAACTACAAAGGAAGATGAGTTCCTCAATCAAATTTTAGCGGATGAAAGTGTAATTATTGATGAAGAAAGTATGTCTTTTGTCAATAATACTATCCACTGGGAGGCATTGCAAGAGGTAAATTTTGAAAACAATAATTAA 2544 0.4068 MEDIISILDHLPVGFRFRPTDEELVNHYLKHKLLGDDFSVQFIPEIDLCKVEPWDVPAKSIFKSDELQWFFFSSVDYKYSNSKRVNRTTEHGFWKSTGNDRNIKTGGSKNVIGTKKTLVFHKGRVPGGQRTNWVIHEYHALASRESQKTYVLCRLMKKFEKKNEGGIDAPIFSGGEPSTSMVSDYGNQVPAGEIPPADILPRMIVDPIFPEEIFFSPVQQPPVGIEVEGFFPNSPTRNACFGNESINMQIPFGVTDDEDEFLNSILVDNEEFVINEERRDCFVNCSTQPKSLRRVYYASSDTDAEVVSNLHGNICSGEYSVRGGMSSLTSNHEAHKEKKESIIQDDFWAVETSSCDSTADEPVETTRLENRYNLRPDNFILQKTVAGRPQTQKKVSNNAVSHIEARKELVTVRSEKDQKSAQNTSSRGILKIRSHQSSNVNSKSSFFYMETTSSNQNLFPRSVYLVNVVIGILLSERSYQQHTDTINPRLSLSDSAISSSIFVFFLCFIQTTNRVECSSKSMGIVGVGFRPTEQELVDFYLKHKLLADDSRVHLIPVIDLCDVEPSDVPVILARSPIRFGDPEWFFFSPVDFKYSNSKRVNRKTKCGFWKATGKDRNIRSGDTNTLIATKKTLVYYKGSVSCGVKSNWVIHEYHAVTFHESKRAFVLCRLMRKPGKATEGGADPLICDEGEPSTLRDSDYGNQATAEGIPSEGSFTGVPLICDEGGPNKLKLSDYGNQATAEGISSEGSFTGVETIFLTRPQADTYFSQNQQSPIEEAYFPNYPFNNAYFRNENNLMHYDFKTTKEDEFLNQILADESVIIDEESMSFVNNTIHWEALQEVNFENNN* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01581 847 MobiDBLite consensus disorder prediction 412 436 - -
Phac10g01581 847 SUPERFAMILY NAC domain 524 673 IPR036093 GO:0003677|GO:0006355
Phac10g01581 847 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 383 - -
Phac10g01581 847 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Phac10g01581 847 Pfam No apical meristem (NAM) protein 525 654 IPR003441 GO:0003677|GO:0006355
Phac10g01581 847 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Phac10g01581 847 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Phac10g01581 847 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Phac10g01581 847 MobiDBLite consensus disorder prediction 676 696 - -
Phac10g01581 847 Gene3D NAC domain 532 678 IPR036093 GO:0003677|GO:0006355
Phac10g01581 847 MobiDBLite consensus disorder prediction 416 436 - -
Phac10g01581 847 ProSiteProfiles NAC domain profile. 523 673 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01581 Phac-Chr10 38934795 38944607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01581 525 680 NAC Transcription Factor Family AT4G35580 46.584 1.97e-38 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac10g01581 NAM 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01581 - - gsj:114419327 945.651