Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01579 ATGGAGGACATAATTTCCATTCTTGATCACTTGCCTGTAGGATTCAGATTCCGTCCCACAGATGAGGAGCTTGTCAATCATTACCTCAAACACAAGTTGCTGGGTGATGATTTCTCTGTTCAGTTCATTCCAGAGATCGACCTTTGCAAAGTGGAACCTTGGGACGTGCCAGCAAAATCAATATTCAAATCCGATGAGCTACAATGGTTTTTCTTCAGTTCTGTGGATTACAAGTACTCCAATAGTAAAAGGGTCAACAGGACAACCGAGCATGGCTTCTGGAAATCCACTGGAAATGACCGTAACATTAAAACTGGTGGCAGTAAAAATGTTATTGGGACAAAAAAGACTCTTGTTTTCCACAAAGGCCGTGTTCCCGGTGGTCAAAGGACCAACTGGGTTATTCATGAATATCATGCTCTTGCCTCCCGTGAAAGCCAGAAGACTTACGTTTTATGCCGCTTAATGAAGAAATTTGAGAAAAAAAATGAAGGGGGAATTGATGCACCAATCTTTAGTGGAGGCGAGCCCAGCACAAGCATGGTTTCTGACTATGGAAATCAGGTACCAGCTGGAGAAATTCCACCTGCAGATATTTTACCTAGAATGATTGTGGATCCAATCTTTCCAGAAGAGATTTTCTTCTCCCCAGTACAACAGCCTCCAGTTGGTATTGAAGTGGAAGGATTTTTCCCAAACTCCCCAACGCGCAATGCTTGTTTTGGAAATGAAAGCATCAATATGCAAATTCCATTTGGAGTTACTGATGATGAAGATGAGTTCCTAAATTCAATACTGGTTGATAATGAAGAGTTTGTTATCAATGAAGAAAGAAGAGACTGTTTTGTCAATTGTTCCACCCAACCAAAGTCATTGAGAAGAGTATACTATGCTAGCAGTGACACAGATGCTGAAGTTGTCTCTAATCTGCATGGCAACATTTGTTCTGGTGAATACTCTGTTCGTGGTGGCATGAGTAGTCTAACTTCAAATCATGAAGCACACAAAGAAAAAAAGGAGAGTATCATTCAAGATGATTTCTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCTGTCGAAACAACAAGATTGGAAAATCGTTATAATCTAAGACCAGACAACTTCATATTACAAAAAACTGTTGCAGGAAGACCTCAAACACAGAAGAAGGTTTCAAACAATGCAGTATCCCACATAGAGGCCCGGAAGGAATTGGTCACTGTGAGATCAGAGAAAGATCAGAAAAGTGCTCAAAATACTAGTTCAAGAGGGATCCTCAAAATCAGAAGCCATCAATCATCTAATGTCAATAGCAAAAGTTCTTTCTTTTACATGGAAACGACTTCATCAAACCAAAACCTGTTTCCACGTTCAGTATATCTTGTCAATGTTGTCATAGGGATTCTGTTGAGTGAACGAAGTTATCAACAACACACAGATACCATAAATCCTCGTTTATCTCTCTCCGATTCAGCGATCTCCTCTTCCATTTTTGTGTTCTTTCTTTGTTTCATTCAAACTACAAACAGAGTTGAGTGTTCATCAAAATCAATGGGTATTGTTGGTGTTGGTTTCCGTCCGACAGAACAAGAACTTGTCGATTTTTACCTCAAACACAAGTTGCTCGCTGATGATTCTCGTGTGCACCTCATCCCTGTCATTGACCTCTGCGATGTGGAACCTTCGGATGTACCAGGTAATCTAAACATCAAAGTACTGAACACCCCCTTTGTCATTTTTATTTCTCTGATCTTTACCTCACTGCTGTTTGATCCTTTTATTGTTTCAAATAGTGATACTTGCAAGATCACCGATTAG 1830 0.4033 MEDIISILDHLPVGFRFRPTDEELVNHYLKHKLLGDDFSVQFIPEIDLCKVEPWDVPAKSIFKSDELQWFFFSSVDYKYSNSKRVNRTTEHGFWKSTGNDRNIKTGGSKNVIGTKKTLVFHKGRVPGGQRTNWVIHEYHALASRESQKTYVLCRLMKKFEKKNEGGIDAPIFSGGEPSTSMVSDYGNQVPAGEIPPADILPRMIVDPIFPEEIFFSPVQQPPVGIEVEGFFPNSPTRNACFGNESINMQIPFGVTDDEDEFLNSILVDNEEFVINEERRDCFVNCSTQPKSLRRVYYASSDTDAEVVSNLHGNICSGEYSVRGGMSSLTSNHEAHKEKKESIIQDDFWAVETSSCDSTADEPVETTRLENRYNLRPDNFILQKTVAGRPQTQKKVSNNAVSHIEARKELVTVRSEKDQKSAQNTSSRGILKIRSHQSSNVNSKSSFFYMETTSSNQNLFPRSVYLVNVVIGILLSERSYQQHTDTINPRLSLSDSAISSSIFVFFLCFIQTTNRVECSSKSMGIVGVGFRPTEQELVDFYLKHKLLADDSRVHLIPVIDLCDVEPSDVPGNLNIKVLNTPFVIFISLIFTSLLFDPFIVSNSDTCKITD* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01579 609 MobiDBLite consensus disorder prediction 412 436 - -
Phac10g01579 609 SUPERFAMILY NAC domain 524 572 IPR036093 GO:0003677|GO:0006355
Phac10g01579 609 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 525 570 - -
Phac10g01579 609 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Phac10g01579 609 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Phac10g01579 609 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Phac10g01579 609 Gene3D NAC domain 532 584 IPR036093 GO:0003677|GO:0006355
Phac10g01579 609 ProSiteProfiles NAC domain profile. 523 609 IPR003441 GO:0003677|GO:0006355
Phac10g01579 609 MobiDBLite consensus disorder prediction 416 436 - -
Phac10g01579 609 Pfam No apical meristem (NAM) protein 525 571 IPR003441 GO:0003677|GO:0006355
Phac10g01579 609 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01579 Phac-Chr10 38934795 38944607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01579 525 584 NAC Transcription Factor Family AT4G35580 41.667 5.53e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac10g01579 NAM 9.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01579 - - gsj:114390609 657.907