Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01578 ATGGAGGACATAATTTCCATTCTTGATCACTTGCCTGTAGGATTCAGATTCCGTCCCACAGATGAGGAGCTTGTCAATCATTACCTCAAACACAAGTTGCTGGGTGATGATTTCTCTGTTCAGTTCATTCCAGAGATCGACCTTTGCAAAGTGGAACCTTGGGACGTGCCAGCAAAATCAATATTCAAATCCGATGAGCTACAATGGTTTTTCTTCAGTTCTGTGGATTACAAGTACTCCAATAGTAAAAGGGTCAACAGGACAACCGAGCATGGCTTCTGGAAATCCACTGGAAATGACCGTAACATTAAAACTGGTGGCAGTAAAAATGTTATTGGGACAAAAAAGACTCTTGTTTTCCACAAAGGCCGTGTTCCCGGTGGTCAAAGGACCAACTGGGTTATTCATGAATATCATGCTCTTGCCTCCCGTGAAAGCCAGAAGACTTACGTTTTATGCCGCTTAATGAAGAAATTTGAGAAAAAAAATGAAGGGGGAATTGATGCACCAATCTTTAGTGGAGGCGAGCCCAGCACAAGCATGGTTTCTGACTATGGAAATCAGGTACCAGCTGGAGAAATTCCACCTGCAGATATTTTACCTAGAATGATTGTGGATCCAATCTTTCCAGAAGAGATTTTCTTCTCCCCAGTACAACAGCCTCCAGTTGGTATTGAAGTGGAAGGATTTTTCCCAAACTCCCCAACGCGCAATGCTTGTTTTGGAAATGAAAGCATCAATATGCAAATTCCATTTGGAGTTACTGATGATGAAGATGAGTTCCTAAATTCAATACTGGTTGATAATGAAGAGTTTGTTATCAATGAAGAAAGAAGAGACTGTTTTGTCAATTGTTCCACCCAACCAAAGTCATTGAGAAGAGTATACTATGCTAGCAGTGACACAGATGCTGAAGTTGTCTCTAATCTGCATGGCAACATTTGTTCTGGTGAATACTCTGTTCGTGGTGGCATGAGTAGTCTAACTTCAAATCATGAAGCACACAAAGAAAAAAAGGAGAGTATCATTCAAGATGATTTCTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCTGTCGAAACAACAAGATTGGAAAATCGTTATAATCTAAGACCAGACAACTTCATATTACAAAAAACTGTTGCAGGAAGACCTCAAACACAGAAGAAGGTTTCAAACAATGCAGTATCCCACATAGAGGCCCGGAAGGAATTGGTCACTGTGAGATCAGAGAAAGATCAGAAAAGTGCTCAAAATACTAGTTCAAGAGGGATCCTCAAAATCAGAAGCCATCAATCATCTAATGTCAATAGCAAAAGTTCTTTCTTTTACATGGAAACGACTTCATCAAACCAAAACCTGTTTCCACGTTCAGTATATCTTGTCAATGTTGTCATAGGGATTCTGTTGAGTGAACGAAGTTATCAACAACACACAGATACCATAAATCCTCGTTTATCTCTCTCCGATTCAGCGATCTCCTCTTCCATTTTTGTGTTCTTTCTTTGTTTCATTCAAACTACAAACAGAGTTGAGTGTTCATCAAAATCAATGGGTATTGTTGGTGTTGGTTTCCGTCCGACAGAACAAGAACTTGTCGATTTTTACCTCAAACACAAGTTGCTCGCTGATGATTCTCGTGTGCACCTCATCCCTGTCATTGACCTCTGCGATGTGGAACCTTCGGATGTACCAGTGATACTTGCAAGATCACCGATTAGATTTGGTGACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAACAGTAAAAGGGTTAACAGGAAAACCAAGTGTGGCTTCTGGAAAGCCACCGGAAAAGACCGTAACATCAGGAGCGGCGACACCAACACTCTCATTGCCACCAAGAAGACTCTTGTTTACTACAAAGGCAGTGTTTCCTGCGGTGTCAAGTCCAACTGGGTTATTCACGAATATCATGCTGTTACCTTTCATGAAAGCAAGAGGGCTTTTGTTTTATGCCGCTTGATGAGGAAACCTGGGAAAGCAACAGAAGGTGGAGCTGATCCACTAATCTGTGATGAAGGGGAGCCCAGTACACTCAGGGATTCTGACTATGGAAATCAGGCAACAGCAGAAGGGATTCCATCTGTAAGCTGA 2142 0.4164 MEDIISILDHLPVGFRFRPTDEELVNHYLKHKLLGDDFSVQFIPEIDLCKVEPWDVPAKSIFKSDELQWFFFSSVDYKYSNSKRVNRTTEHGFWKSTGNDRNIKTGGSKNVIGTKKTLVFHKGRVPGGQRTNWVIHEYHALASRESQKTYVLCRLMKKFEKKNEGGIDAPIFSGGEPSTSMVSDYGNQVPAGEIPPADILPRMIVDPIFPEEIFFSPVQQPPVGIEVEGFFPNSPTRNACFGNESINMQIPFGVTDDEDEFLNSILVDNEEFVINEERRDCFVNCSTQPKSLRRVYYASSDTDAEVVSNLHGNICSGEYSVRGGMSSLTSNHEAHKEKKESIIQDDFWAVETSSCDSTADEPVETTRLENRYNLRPDNFILQKTVAGRPQTQKKVSNNAVSHIEARKELVTVRSEKDQKSAQNTSSRGILKIRSHQSSNVNSKSSFFYMETTSSNQNLFPRSVYLVNVVIGILLSERSYQQHTDTINPRLSLSDSAISSSIFVFFLCFIQTTNRVECSSKSMGIVGVGFRPTEQELVDFYLKHKLLADDSRVHLIPVIDLCDVEPSDVPVILARSPIRFGDPEWFFFSPVDFKYSNSKRVNRKTKCGFWKATGKDRNIRSGDTNTLIATKKTLVYYKGSVSCGVKSNWVIHEYHAVTFHESKRAFVLCRLMRKPGKATEGGADPLICDEGEPSTLRDSDYGNQATAEGIPSVS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01578 713 MobiDBLite consensus disorder prediction 412 436 - -
Phac10g01578 713 MobiDBLite consensus disorder prediction 696 713 - -
Phac10g01578 713 Gene3D NAC domain 532 678 IPR036093 GO:0003677|GO:0006355
Phac10g01578 713 SUPERFAMILY NAC domain 524 673 IPR036093 GO:0003677|GO:0006355
Phac10g01578 713 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Phac10g01578 713 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Phac10g01578 713 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 280 - -
Phac10g01578 713 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Phac10g01578 713 Pfam No apical meristem (NAM) protein 525 654 IPR003441 GO:0003677|GO:0006355
Phac10g01578 713 MobiDBLite consensus disorder prediction 676 713 - -
Phac10g01578 713 MobiDBLite consensus disorder prediction 416 436 - -
Phac10g01578 713 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Phac10g01578 713 ProSiteProfiles NAC domain profile. 523 673 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01578 Phac-Chr10 38934581 38944607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01578 525 680 NAC Transcription Factor Family AT4G35580 46.584 1.74e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac10g01578 NAM 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01578 - - gsj:114419327 878.626