Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01577 ATGACTTTTTTGTGTTATATATTCATTTCCACAACACAACACATCACAAACACTAAGCTTTTGTCACCACCTTCCCTTCCCATCTTTGTTGCAAACTACAAAGTTAAGTGTTCACCAAAACCAATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCACATGTCCACCTCATCCCTGACATTGACCTTTGTGAGGTGGAACCTTGGGACGTACCAATGATATTAGCTGGATCAGCTGTACAATTCGATCTCCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGGTTAACAGAACAACCAAGTGTGGGTTCTGGAAACCTACTGGAAAAGATCGTGAGATTAGGAGCTTGGACACAGACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATAAAGGCCGTGTTTCCCGTGGTGTCAAGTCCAACTGGATTATTCATGAATACCATGCTGTTACCTTTCACGAAAGCCAGAGGACTTCTGTTTTATGTCGCCTGATGAAGAAACCTGGAACAACAACTGAAGGTGAAAGTGATACACAGACTTGCGATGAAGGGGAGAGCAGTAGAGTCATGGTTTCTGGCTATGAAAATGAGGCAATAGAAGGGGGGATTCCTTCAAGAGGTACTTCTGCTGGAATAGAGACGACCTTTCAGCCTATGCATCAAACATATAATTACTTCCCCCCACTGCAACAGTCTCCAATTGGTATTGAGCAAGAGGAAGCTTCTTTTCCAAACTCCCCATTTTACAGTTCCCATTTTAGAAATGAATCCAACAATATGCAGATTCCATTTGAAACTACCCACGAGGAGGAGCAATTCCTGAATTCTATTTTGGTTGATGAGAGAGAACTTGGACACCAGATGCCATCAACCTTCTGA 957 0.4211 MTFLCYIFISTTQHITNTKLLSPPSLPIFVANYKVKCSPKPMEIVGFGFRPTEEELVDYYLKHRLLGDDPHVHLIPDIDLCEVEPWDVPMILAGSAVQFDLPEWFFFSPVDFKYSNSKRVNRTTKCGFWKPTGKDREIRSLDTDTLIATKKTLVYYKGRVSRGVKSNWIIHEYHAVTFHESQRTSVLCRLMKKPGTTTEGESDTQTCDEGESSRVMVSGYENEAIEGGIPSRGTSAGIETTFQPMHQTYNYFPPLQQSPIGIEQEEASFPNSPFYSSHFRNESNNMQIPFETTHEEEQFLNSILVDERELGHQMPSTF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01577 318 SUPERFAMILY NAC domain 44 193 IPR036093 GO:0003677|GO:0006355
Phac10g01577 318 Gene3D NAC domain 52 196 IPR036093 GO:0003677|GO:0006355
Phac10g01577 318 ProSiteProfiles NAC domain profile. 43 193 IPR003441 GO:0003677|GO:0006355
Phac10g01577 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 45 210 - -
Phac10g01577 318 Pfam No apical meristem (NAM) protein 45 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01577 Phac-Chr10 38925860 38927791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01577 45 200 NAC Transcription Factor Family AT4G35580 50.000 1.76e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac10g01577 NAM 2.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01577 - - gmx:100779816 400.593