Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01576 | ATGACTTTTTTGTGTTATATATTCATTTCCACAACACAACACATCACAAACACTAAGCTTTTGTCACCACCTTCCCTTCCCATCTTTGTTGCAAACTACAAAGTTAAGTGTTCACCAAAACCAATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCACATGTCCACCTCATCCCTGACATTGACCTTTGTGAGGTGGAACCTTGGGACGTACCAATGATATTAGCTGGATCAGCTGTACAATTCGATCTCCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGGTTAACAGAACAACCAAGTGTGGGTTCTGGAAACCTACTGGAAAAGATCGTGAGATTAGGAGCTTGGACACAGACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATAAAGGCCGTGTTTCCCGTGGTGTCAAGTCCAACTGGATTATTCATGAATACCATGCTGTTACCTTTCACGAAAGCCAGAGGACTTCTGTTTTATGTCGCCTGATGAAGAAACCTGGAACAACAACTGAAGGTGAAAGTGATACACAGACTTGCGATGAAGGGGAGAGCAGTAGAGTCATGGTTTCTGGCTATGAAAATGAGGCAATAGAAGGGGGGATTCCTTCAGTAAGCTGA | 702 | 0.4231 | MTFLCYIFISTTQHITNTKLLSPPSLPIFVANYKVKCSPKPMEIVGFGFRPTEEELVDYYLKHRLLGDDPHVHLIPDIDLCEVEPWDVPMILAGSAVQFDLPEWFFFSPVDFKYSNSKRVNRTTKCGFWKPTGKDREIRSLDTDTLIATKKTLVYYKGRVSRGVKSNWIIHEYHAVTFHESQRTSVLCRLMKKPGTTTEGESDTQTCDEGESSRVMVSGYENEAIEGGIPSVS* | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01576 | 233 | Pfam | No apical meristem (NAM) protein | 45 | 174 | IPR003441 | GO:0003677|GO:0006355 | |
Phac10g01576 | 233 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 45 | 205 | - | - | |
Phac10g01576 | 233 | ProSiteProfiles | NAC domain profile. | 43 | 193 | IPR003441 | GO:0003677|GO:0006355 | |
Phac10g01576 | 233 | Gene3D | NAC domain | 52 | 196 | IPR036093 | GO:0003677|GO:0006355 | |
Phac10g01576 | 233 | SUPERFAMILY | NAC domain | 44 | 193 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01576 | Phac-Chr10 | 38925860 | 38927791 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g01576 | 45 | 200 | NAC Transcription Factor Family | AT4G35580 | 50.000 | 7.45e-47 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Phac10g01576 | NAM | 1.3e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01576 | - | - | vra:106753224 | 329.717 |