Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01563 ATGCACACTAAAGAGACTGCAACTAATCAAGATAACATCAACATGGCTACATCAGAGGAAACCAATAATGGTGAAGCCCTGCAACTTAAACACGTTGAAGAAGACCACGATGGCTTCCTCTTTGCCATGAACATGGCTTCTACTGTGGTGTACCCTCTTGCTGTTAAGACCGCGAATGAGCTTGGTATCTTTGAGATCATGGCCAAAGCAGGTGAAGGTGCAAAGCTCTCAGCAGAAGAGATTACAGAAAGAGTTGGCATAAAGAATCCAGAAGCACCAACTATGGTGGATCGAATTCTGAGGCTATTGGCTAGTCACTCCATGCTATCTTCATGTCTTGGTGAAGATGGCCAAAATTCTGGCAAGAGGCTCTATAGCCTCACCTATGCATCCAAGTGTTTTGTTCCTGATGCTGATGGTGTCTCATTTGGAGCTTCCTTGAACTTGATTCTTGGCAAGGTCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATCGTGGAAGGTGGCGTAGCATTCGACAGGGTTCATGGGATGAACGCATTTGAGTATTCAGCTGTTGATCCTAAGTACAATGATGTTTTCAACAAAGCTATGTTCAACATTACCACCATAATCACAAACAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAAGAGGCTTGTGGATGTTGGTGGTGGTCTTGGGAGCAATCTCAAACTAATCACTTCTAAATATCCCAATGTTGAAGGTCTTAATTTTGACTTGCCACATGTCATAGAACATGCCCCTACCTACCCTGGTGTGGAACATGTAGCAGGAGATATGTTTGAGAGTGTTCCCAATGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGGGTGATGAACAGTGTGTGAAGTTGCTGAAGAATTGCTACAAAGCTATTCCGAGTGATGGAAAAGTGATTGTTGTGGATTTGATTATTCCTGATTTGCCAGAGAACACAGTCAGTGCGAGGAGTGGTTTTCAAGCTGACCTCTTGATGATGGTTTCAAACCCAGGAGGCAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTGTCTTCTGGATTCAGTGGCATCAGATTCGTTTGTTGTGTCTCTGGCTTCTGGATTATGGAGTTTTTCAAGTAG 1149 0.4369 MHTKETATNQDNINMATSEETNNGEALQLKHVEEDHDGFLFAMNMASTVVYPLAVKTANELGIFEIMAKAGEGAKLSAEEITERVGIKNPEAPTMVDRILRLLASHSMLSSCLGEDGQNSGKRLYSLTYASKCFVPDADGVSFGASLNLILGKVFLESWTELKGAIVEGGVAFDRVHGMNAFEYSAVDPKYNDVFNKAMFNITTIITNRVLELYDGFKNIKRLVDVGGGLGSNLKLITSKYPNVEGLNFDLPHVIEHAPTYPGVEHVAGDMFESVPNGDAIFMKWILHDWGDEQCVKLLKNCYKAIPSDGKVIVVDLIIPDLPENTVSARSGFQADLLMMVSNPGGKERTQNEFMELALSSGFSGIRFVCCVSGFWIMEFFK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01563 382 FunFam Caffeic acid 3-O-methyltransferase 19 134 - -
Phac10g01563 382 Gene3D - 21 133 IPR036388 -
Phac10g01563 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 380 IPR029063 -
Phac10g01563 382 PIRSF O-mtase 19 382 IPR016461 GO:0008168
Phac10g01563 382 Gene3D Vaccinia Virus protein VP39 136 382 IPR029063 -
Phac10g01563 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 382 IPR016461 GO:0008168
Phac10g01563 382 SUPERFAMILY "Winged helix" DNA-binding domain 33 137 IPR036390 -
Phac10g01563 382 Pfam O-methyltransferase domain 159 364 IPR001077 GO:0008171
Phac10g01563 382 PANTHER O-METHYLTRANSFERASE 42 368 IPR016461 GO:0008168
Phac10g01563 382 FunFam Caffeic acid O-methyltransferase 135 382 - -
Phac10g01563 382 Pfam Dimerisation domain 54 104 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01563 Phac-Chr10 38757478 38759905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01563 28 382 Monolignol Biosynthesis Gene Families AT5G54160 50.843 4.33e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01563 K13066 - gmx:100789402 603.594