Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01562 ATGCACACTAAAGAGACTGCAACTAATCAAGATAACATCAACATGGCTACATCAGAGGAAACCAATAATGGTGAAGCCCTGCAACTTAAACACGTTGAAGAAGACCACGATGGCTTCCTCTTTGCCATGAACATGGCTTCTACTGTGGTGTACCCTCTTGCTGTTAAGACCGCGAATGAGCTTGGTATCTTTGAGATCATGGCCAAAGCAGGTGAAGGTGCAAAGCTCTCAGCAGAAGAGATTACAGAAAGAGTTGGCATAAAGAATCCAGAAGCACCAACTATGGTGGATCGAATTCTGAGGCTATTGGCTAGTCACTCCATGCTATCTTCATGTCTTGGTGAAGATGGCCAAAATTCTGGCAAGAGGCTCTATAGCCTCACCTATGCATCCAAGTGTTTTGTTCCTGATGCTGATGGTGTCTCATTTGGAGCTTCCTTGAACTTGATTCTTGGCAAGGTCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATCGTGGAAGGTGGCGTAGCATTCGACAGGGTTCATGGGATGAACGCATTTGAGTATTCAGCTGTTGATCCTAAGTACAATGATGTTTTCAACAAAGCTATGTTCAACATTACCACCATAATCACAAACAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAAGAGGCTTGTGGATGTTGGTGGTGGTCTTGGGAGCAATCTCAAACTAATCACTTCTAAATATCCCAATGTTGAAGGTCTTAATTTTGACTTGCCACATGTCATAGAACATGCCCCTACCTACCCTGGTATCTTCTACCCATCTTTTATAATACAAACAAACTAA 825 0.4327 MHTKETATNQDNINMATSEETNNGEALQLKHVEEDHDGFLFAMNMASTVVYPLAVKTANELGIFEIMAKAGEGAKLSAEEITERVGIKNPEAPTMVDRILRLLASHSMLSSCLGEDGQNSGKRLYSLTYASKCFVPDADGVSFGASLNLILGKVFLESWTELKGAIVEGGVAFDRVHGMNAFEYSAVDPKYNDVFNKAMFNITTIITNRVLELYDGFKNIKRLVDVGGGLGSNLKLITSKYPNVEGLNFDLPHVIEHAPTYPGIFYPSFIIQTN* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01562 274 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 274 IPR016461 GO:0008168
Phac10g01562 274 PANTHER O-METHYLTRANSFERASE 42 258 IPR016461 GO:0008168
Phac10g01562 274 Gene3D - 20 133 IPR036388 -
Phac10g01562 274 FunFam Caffeic acid 3-O-methyltransferase 18 134 - -
Phac10g01562 274 Pfam Dimerisation domain 54 104 IPR012967 GO:0046983
Phac10g01562 274 SUPERFAMILY "Winged helix" DNA-binding domain 33 137 IPR036390 -
Phac10g01562 274 Gene3D Vaccinia Virus protein VP39 136 269 IPR029063 -
Phac10g01562 274 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 264 IPR029063 -
Phac10g01562 274 Pfam O-methyltransferase domain 159 261 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01562 Phac-Chr10 38757478 38759905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01562 28 264 Monolignol Biosynthesis Gene Families AT5G54160 48.739 1.30e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01562 K13066 - var:108346436 439.884