Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01554 ATGGAAGCACAAAGCTCTCAGCAAACGCAAGTTATCGAGATCAGTGGAGATTTTCCTGATGGCGGAAGAAAGATTTGTGGGGAAGCGCCATGTGGGTTTGCTGATGCCGGATCCATCTCCAAGGATTCTGAAGAAAGATCAGTTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTCGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGTCCTAAAAGCGTGGATGGTTTCCTAATGTTTTTAGTTTCCGCATTTGGTCTTGTGGTTAATATCATTATGGCTTTGTTATTGGGTCATGATCATGGCCACGGACATGATGGACATGGACATGGACATGGCCACGGACATGGACACAGCCACAGTCACAGTCACGGAATTACGGTGTCTACCCATCACGATGCAACAAAACATACAAAAGATGAGCACCATCACACACATGATGATCACACGGACCATCACGATGAAAAGCATTCTAAAGATGCTATCCATCACACTCATGAAGATCACTTGCACCATCATGATCACGAAGAACTTACTCAACCTCTTCTTGAAGAATCAAAAGTTGAAACTAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTACTTGGAGATTCTATACAGAGTATCGGAGTAATGATTGGGGGAGCAGTTATATGGTATAAACCCGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATCGTTTTGGTGACAACCATCAATATGCTTCGAAATATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTCAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCACATTTGGGCCATTACAGTGGGAAAAGTTTTACTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCATGTAACCATACAGATAGAACGCTAG 1251 0.4229 MEAQSSQQTQVIEISGDFPDGGRKICGEAPCGFADAGSISKDSEERSVSMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHGHGHSHSHSHGITVSTHHDATKHTKDEHHHTHDDHTDHHDEKHSKDAIHHTHEDHLHHHDHEELTQPLLEESKVETKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATQLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01554 416 Gene3D Cation efflux protein transmembrane domain 49 337 IPR027469 -
Phac10g01554 416 MobiDBLite consensus disorder prediction 182 255 - -
Phac10g01554 416 NCBIfam cation diffusion facilitator family transporter 50 416 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phac10g01554 416 MobiDBLite consensus disorder prediction 204 255 - -
Phac10g01554 416 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 339 IPR027469 -
Phac10g01554 416 Pfam Cation efflux family 53 338 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phac10g01554 416 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 416 - -
Phac10g01554 416 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 345 415 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01554 Phac-Chr10 38719391 38724448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01554 1 416 Inorganic Solute Cotransporters AT2G46800 63.915 9.99e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01554 K14689 - gmx:100790458 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01554 10 38719391 38724448 Phac10g01554 10 38719391 38724448 ECH