Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01550 ATGGCTGAGTTGAGTGGTACGATGCAAGAGCACGGGACGGACAACAATAATCGCTCTGCAGATGTGGTTCTGTGGGAGAGGTTTCTACCGCGGATGGTGCTTAGAGTCCTGCTTGTGGAAGCTGATCATTCCACAAGACAAATCATCGCCGCGCTTCTTCGCAAATGCAGTTACACAGTTATCGCGGTTCCAGACGGATTAAAGGCATGGGAATTGTTGAAGAAGAAGGCGTCTGAGCTAGATCTTATAATAACTGAAGTGGATCTGCCAGCAATATCTGGATTTGCACTTCTTTCTTTAATCATGGGGCATGAAATTTGTAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCTGTAAGCATGGTGTTGAAATGCATGCTAAAAGGGGCAGTTGATTTTCTTATAAAACCTATTCGGAGGAATGAACTCGTGAACTTGTGGCAACATGTATGGAGAAGGCACGCTAGTAGCTCTCCTACTCAAAATACAACTTTTTCACCAACAAATCTTAAAACTGCCTCCGAGGATAACTCTGCAAGCAATAAATCCAGTGGTTCTGTGGCTTCCTCTAAGAAAAACAACGAATGCAGTGAGAGATTAAGTGAGACTCAAGACATGCCCCAGCTGAAAAATTCTAAACAGAAGAAAACTGATTTGGTGAAACATGAAAAGTTTGCCAGATTTGAAAGTGAATCAGCAAAGATTAATAATGAAACAAGAGATAAATCAATTACAATTGTATCAGACACTGCAAGGTGCGACAAAACTTTTGAATCGACGGATCTAAGGCTAGAACAAGACCATTGCTGTGCTGATACTGAAATTGAGGTTGAAATCTTAAAATATGATTTAGGCATCGGAGATTCTAATATTAGTACTGAGTTGCATGGATGGAGTGATGAACGGGTGAAACCAATTAAAGGAGCTATTGATTTGATTGCTACATTTGGAAATCTTCCAAAGCACCCTGATGAAAACTGTAATCTCAATGGTGGTAATACAACCATGTTTGATGGTGTTACGCAATTGGAACTTTCTTTAAGAAGTGATTTTCCTGGAAGCTCATGTAAACAAGCAAGCGAAGCAACTGAGGAATCTCAAAGATTGAACCATTCACACAACTCTGCATTTTCTTGGTATAGTAATAGTAAATTGGTGCACCCTCTTTTTCAAACACCATCAATTGCATCAACCGAAGTAAACAACCACAGTTGGGATTCTCACGAATCCCATAAATTGTCTCGAACTACTTCTGGAAATTGTTGTCAGTATGGTGGCTCAAATAAAAACCTGGAGAATATGATCAGTACAGTTATTGATCAGTATGGACAAGTTAAGCCAAATTTATCAAACAGTCAATGTGGAATGTTACCTGTTTCAGGGGTTATTTCGGATCTTAAGTCCAAGGGACATGGTAATGTTCTCACTTCTGTGTTCTCCGCACCATGCGGTACTCATCCTGTGCGGAGTTCGAAACCAGTCTGCCAGAACGAGAGTTCTCCCTTTCCCATAAGTACCACCTCCCAGTCCAATCCGGAAAGTCACAACTCTGACCAATATCATGACTGTTCCAATGTTGCTCCTTGTCTTAATCAAAATGTAAAGGAAGACACTGATTTGGATCAGGCAAGGCATGATTCTCCTGCTGCTGATCAGAGTACTGGTAACAGTTTATGCCATGATACTTCATATCATGTCAAAAGTAGTGCTTATGGAAGCATGGACAGTGGAAATGATGGGCATGCTACTTCAGCTATAGTATCCAAGAACAACCCAGAAGGTTTCAGTGATAGTGTTTGTCATAATTATGATGGGTCTCGAGCCACATATTCTCATCGCACTAGTCAAAGAGAAGCAGCTCTAACCAAGTTTCGACTGAAGCGGAAAGAGCGATGCTTCGAGAAAAAGGTTCGATACCAAAGCCGGAAGAGACTGGCAGAACAGCGGCCTCGGGTCAAAGGGCAGTTTGTACGCCAAGTACACAATGATCATCCAGTTGCTGATGCTGGTGCTGATTCATAA 2028 0.4142 MAELSGTMQEHGTDNNNRSADVVLWERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWELLKKKASELDLIITEVDLPAISGFALLSLIMGHEICKNIPVIMMSSHDSVSMVLKCMLKGAVDFLIKPIRRNELVNLWQHVWRRHASSSPTQNTTFSPTNLKTASEDNSASNKSSGSVASSKKNNECSERLSETQDMPQLKNSKQKKTDLVKHEKFARFESESAKINNETRDKSITIVSDTARCDKTFESTDLRLEQDHCCADTEIEVEILKYDLGIGDSNISTELHGWSDERVKPIKGAIDLIATFGNLPKHPDENCNLNGGNTTMFDGVTQLELSLRSDFPGSSCKQASEATEESQRLNHSHNSAFSWYSNSKLVHPLFQTPSIASTEVNNHSWDSHESHKLSRTTSGNCCQYGGSNKNLENMISTVIDQYGQVKPNLSNSQCGMLPVSGVISDLKSKGHGNVLTSVFSAPCGTHPVRSSKPVCQNESSPFPISTTSQSNPESHNSDQYHDCSNVAPCLNQNVKEDTDLDQARHDSPAADQSTGNSLCHDTSYHVKSSAYGSMDSGNDGHATSAIVSKNNPEGFSDSVCHNYDGSRATYSHRTSQREAALTKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQVHNDHPVADAGADS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01550 675 MobiDBLite consensus disorder prediction 488 524 - -
Phac10g01550 675 Gene3D - 32 271 - -
Phac10g01550 675 MobiDBLite consensus disorder prediction 645 660 - -
Phac10g01550 675 SUPERFAMILY CheY-like 34 161 IPR011006 -
Phac10g01550 675 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Phac10g01550 675 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 351 IPR045279 GO:0009736
Phac10g01550 675 SMART REC_2 34 149 IPR001789 GO:0000160
Phac10g01550 675 MobiDBLite consensus disorder prediction 645 675 - -
Phac10g01550 675 ProSiteProfiles CCT domain profile. 619 661 IPR010402 GO:0005515
Phac10g01550 675 MobiDBLite consensus disorder prediction 542 563 - -
Phac10g01550 675 CDD psREC_PRR 36 139 - -
Phac10g01550 675 MobiDBLite consensus disorder prediction 159 210 - -
Phac10g01550 675 MobiDBLite consensus disorder prediction 549 563 - -
Phac10g01550 675 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
Phac10g01550 675 Pfam CCT motif 619 661 IPR010402 GO:0005515
Phac10g01550 675 MobiDBLite consensus disorder prediction 159 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01550 Phac-Chr10 38683681 38689734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01550 582 663 Response Regulator Gene Family AT5G24470 56.098 1.01e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac10g01550 Response_reg 2.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01550 K12130 - gmx:100791698 974.541