Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01548 ATGTCTTCTCATGATTCTGTAAGCATGGTGTTGAAATGCATGCTAAAAGGGGCAGTTGATTTTCTTATAAAACCTATTCGGAGGAATGAACTCGTGAACTTGTGGCAACATGTATGGAGAAGGCACGCTAGTAGCTCTCCTACTCAAAATACAACTTTTTCACCAACAAATCTTAAAACTGCCTCCGAGGATAACTCTGCAAGCAATAAATCCAGTGGTTCTGTGGCTTCCTCTAAGAAAAACAACGAATGCAGTGAGAGATTAAGTGAGACTCAAGACATGCCCCAGCTGAAAAATTCTAAACAGAAGAAAACTGATTTGGTGAAACATGAAAAGTTTGCCAGATTTGAAAGTGAATCAGCAAAGATTAATAATGAAACAAGAGATAAATCAATTACAATTGTATCAGACACTGCAAGGTGCGACAAAACTTTTGAATCGACGGATCTAAGGCTAGAACAAGACCATTGCTGTGCTGATACTGAAATTGAGGTTGAAATCTTAAAATATGATTTAGGCATCGGAGATTCTAATATTAGTACTGAGTTGCATGGATGGAGTGATGAACGGGTGAAACCAATTAAAGGAGCTATTGATTTGATTGCTACATTTGGAAATCTTCCAAAGCACCCTGATGAAAACTGTAATCTCAATGGTGGTAATACAACCATGTTTGATGGTGTTACGCAATTGGAACTTTCTTTAAGAAGTGATTTTCCTGGAAGCTCATGTAAACAAGCAAGCGAAGCAACTGAGGAATCTCAAAGATTGAACCATTCACACAACTCTGCATTTTCTTGGTATAGTAATAGTAAATTGGTGCACCCTCTTTTTCAAACACCATCAATTGCATCAACCGAAGTAAACAACCACAGTTGGGATTCTCACGAATCCCATAAATTGTCTCGAACTACTTCTGGAAATTGTTGTCAGTATGGTGGCTCAAATAAAAACCTGGAGAATATGATCAGTACAGTTATTGATCAGTATGGACAAGTTAAGCCAAATTTATCAAACAGTCAATGTGGAATGTTACCTGTTTCAGGGGTTATTTCGGATCTTAAGTCCAAGGGACATGGTAATGTTCTCACTTCTGTGTTCTCCGCACCATGCGGTACTCATCCTGTGCGGAGTTCGAAACCAGTCTGCCAGAACGAGAGTTCTCCCTTTCCCATAAGTACCACCTCCCAGTCCAATCCGGAAAGTCACAACTCTGACCAATATCATGACTGTTCCAATGTTGCTCCTTGTCTTAATCAAAATGTAAAGGAAGACACTGATTTGGATCAGGCAAGGCATGATTCTCCTGCTGCTGATCAGAGTACTGGTAACAGTTTATGCCATGATACTTCATATCATGTCAAAAGTAGTGCTTATGGAAGCATGGACAGTGGAAATGATGGGCATGCTACTTCAGCTATAGTATCCAAGAACAACCCAGAAGGTTTCAGTGATAGTGTTTGTCATAATTATGATGGGTCTCGAGCCACATATTCTCATCGCACTAGTCAAAGAGAAGCAGCTCTAACCAAGTTTCGACTGAAGCGGAAAGAGCGATGCTTCGAGAAAAAGGTTCGATACCAAAGCCGGAAGAGACTGGCAGAACAGCGGCCTCGGGTCAAAGGGCAGTTTGTACGCCAAGTACACAATGATCATCCAGTTGCTGATGCTGGTGCTGATTCATAA 1686 0.4063 MSSHDSVSMVLKCMLKGAVDFLIKPIRRNELVNLWQHVWRRHASSSPTQNTTFSPTNLKTASEDNSASNKSSGSVASSKKNNECSERLSETQDMPQLKNSKQKKTDLVKHEKFARFESESAKINNETRDKSITIVSDTARCDKTFESTDLRLEQDHCCADTEIEVEILKYDLGIGDSNISTELHGWSDERVKPIKGAIDLIATFGNLPKHPDENCNLNGGNTTMFDGVTQLELSLRSDFPGSSCKQASEATEESQRLNHSHNSAFSWYSNSKLVHPLFQTPSIASTEVNNHSWDSHESHKLSRTTSGNCCQYGGSNKNLENMISTVIDQYGQVKPNLSNSQCGMLPVSGVISDLKSKGHGNVLTSVFSAPCGTHPVRSSKPVCQNESSPFPISTTSQSNPESHNSDQYHDCSNVAPCLNQNVKEDTDLDQARHDSPAADQSTGNSLCHDTSYHVKSSAYGSMDSGNDGHATSAIVSKNNPEGFSDSVCHNYDGSRATYSHRTSQREAALTKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQVHNDHPVADAGADS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01548 561 MobiDBLite consensus disorder prediction 435 449 - -
Phac10g01548 561 Gene3D - 1 158 - -
Phac10g01548 561 MobiDBLite consensus disorder prediction 428 449 - -
Phac10g01548 561 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 124 547 IPR045281 GO:0009909
Phac10g01548 561 MobiDBLite consensus disorder prediction 43 106 - -
Phac10g01548 561 MobiDBLite consensus disorder prediction 43 96 - -
Phac10g01548 561 ProSiteProfiles CCT domain profile. 505 547 IPR010402 GO:0005515
Phac10g01548 561 Pfam CCT motif 505 547 IPR010402 GO:0005515
Phac10g01548 561 MobiDBLite consensus disorder prediction 374 410 - -
Phac10g01548 561 MobiDBLite consensus disorder prediction 531 561 - -
Phac10g01548 561 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Phac10g01548 561 MobiDBLite consensus disorder prediction 531 546 - -
Phac10g01548 561 SUPERFAMILY CheY-like 1 47 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01548 Phac-Chr10 38683681 38689734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01548 503 551 Response Regulator Gene Family AT2G46790 85.714 1.49e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac10g01548 CCT 8.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01548 K12130 - gmx:100791698 800.431