Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01527 ATGGGGAAGAAGGGAAGTGGTAGTTCCTGGTTAACTGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACACTGACAAAAGGAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAGGAAAAGAAAAGGGAAAAGAGAAGATGGATTTTCAGGAAAACTCACATGAGTCACGAAGGAGTAAGCAGCAGCAACAACACTCAACAAAAGTTGAAGCATGATGTGGCGGCAACTAGTGAAGGTTCAAGAACAGACCAGGATCAGAAGCATGCACTTGCGGTGGCCGTGGCCACCGCAGAAGCAGCCATGGCCACCGCTCAGGTGGCGGTGGAGGTGGCAAGGTTGACCAAACCTGCTAGCCATGCAAGGGAGCATTATGCTGCTGTTGTGATCCAAACAGCTTTCAGAGGGTATCTGGCAAGAAGAGCACTTCGTGCACTAAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTCCTTGACCAGCGCATAAGGTCTTCACTTGACGGTAGCAGAAAATCCACTTTCAGTGACACCGCCAGTGTTTGGGACTCGCGGTATCTTCAGGATATTTCTGATAGGAAATCAATATCAAGAGAGGGGAGCAGCATTGCAGATGACTGGGATGAACGTCCTCACACTGTTGAAGAAGTGAAGGCTATGTTGCAGCAGAGAAAGGAAGCTGCAATGAAGAGGGACAAGACCTTATCCCAAGCCTTTTCCCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAGTTGGAAGAGAGACCAAAATGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAAAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTGGAGATTGACACCTCTCAGCCTTATTCGTATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATATAACCCAAACCACCATCAACCACAGAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCCTTCACCAATCCCCTGCAACCCCTTCTCCTGCCAAGTCAAGGCCCATCCAAGTGCGGTCAGCAAGCCCTCGTTGCATCAGAGAAGACAGAAACTACCCCACCTCCCAAACACCAAGCTTGAGGTCCAATTACCATTATACAGGAAACTTATACCAAAATGGAAGGGCTGTTGGAAGTGGAACTAGTAGCGGTGGTGGTGGTGGTGGTGCTACATTGCCTAATTACATGGCGGCAACGGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGCGCTCCAAGGCAGAGGCCTTCCACACCAGAGAGGGACAGGGTGGGATCAGCAAAGAAGAGGCTTTCTTTTCCTGCTCCTGACCCTTATAGCGTAGGAGTGAGTTACGGAAATTATGGGCATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGTTGGAGCAGCAGTCAAATTACTCCTCTTGCTGCACTGAAAGTCTTGGTGGTGGTGAGGTTTCTCCTTCTTCAACCGGTGACCTTAGGAGGTGGTTGAGATGA 1638 0.4847 MGKKGSGSSWLTAVKRAFRSPTKDTDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVSSSNNTQQKLKHDVAATSEGSRTDQDQKHALAVAVATAEAAMATAQVAVEVARLTKPASHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSLHQSPATPSPAKSRPIQVRSASPRCIREDRNYPTSQTPSLRSNYHYTGNLYQNGRAVGSGTSSGGGGGGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCCTESLGGGEVSPSSTGDLRRWLR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01527 545 SMART iq_5 125 147 IPR000048 GO:0005515
Phac10g01527 545 SMART iq_5 148 169 IPR000048 GO:0005515
Phac10g01527 545 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Phac10g01527 545 FunFam IQ-domain 11 125 176 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 302 317 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 318 382 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 520 545 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 421 440 - -
Phac10g01527 545 PANTHER IQ-DOMAIN 5-RELATED 1 481 - -
Phac10g01527 545 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Phac10g01527 545 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Phac10g01527 545 MobiDBLite consensus disorder prediction 59 77 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 302 412 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 19 57 - -
Phac10g01527 545 Pfam Protein of unknown function (DUF4005) 388 494 IPR025064 -
Phac10g01527 545 MobiDBLite consensus disorder prediction 1 89 - -
Phac10g01527 545 Gene3D - 123 179 - -
Phac10g01527 545 MobiDBLite consensus disorder prediction 446 482 - -
Phac10g01527 545 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Phac10g01527 545 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01527 Phac-Chr10 38498046 38501590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01527 1 545 IQD Protein Family AT1G01110 58.082 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01527 - - gmx:100786729 957.977