Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01515 ATGGGTCAGTGCTACGGCAAGTCCAATCTCACGCCGGAAAATGACGCCGCCGCCGCAGAGGAAACCACCGTCGACACAGTTGTCGCGGTGGCCGGATCCGCTGACGCCCCGCTCTCTCCACTGCCGGTGAAGGGCACGCCGGCGCGGGCCAGTCCATGGCCGAGTCCCTACCCACATGGTGGCGGCGTGACTCCTTCCCCGGCGAGAGGCACGCCGAGGAGATTTTTTCGGCGGTCGTTCGCGCCTCCGTCGCCGGCGAAGCACATAAGGGCGTCGCTAGCGAAGCGGCTTGGGCACGGGAAGACGCCTAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCGGCGGTGGCGACTGAACAATCGCTGGATAAGAGCTTTGGGTACGGCAAGAATTTTGGGGCGAAATATGAAATTGGGAAAGAGGTGGGTCGAGGGCATTTTGGTCATACTTGTTATGCTAAGGGGAAGAAGGGCGAACTCAAAGACCAACCTGTTGCTGTTAAGATCATTTCCAAGGCGAAGATGACTACTGCAATAGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTTCACCGGGACCTTAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGACTTGAAGCTTATTGATTTCGGTCTATCTGACTTCATCCGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTTGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGGATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTTCTGCCTCTGCAGAGGCCAAGGACTTTGTAAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTAAGGGATGAAAGCCGTCCAATCCCTTTAGACATATTAGTTTATAAACTAGTGAAGGCTTATCTTCTTGCAACACCACTCAAACGTGCAGCAGTGAAGGCACTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGGACCCAATAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGTTTTCTACTGCTTCCCTATAAAATCCTTAGAATCCAAATGGTTGATAAATTAA 1452 0.4835 MGQCYGKSNLTPENDAAAAEETTVDTVVAVAGSADAPLSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHGKTPKEGPIPEEEAAAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADLKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPSASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDESRPIPLDILVYKLVKAYLLATPLKRAAVKALSKALPEDELPYLRAQFRLLGPNRDGLISLDNFKMVFYCFPIKSLESKWLIN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01515 483 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Phac10g01515 483 FunFam Calcium-dependent protein kinase SK5 308 406 - -
Phac10g01515 483 Gene3D Phosphorylase Kinase; domain 1 129 225 - -
Phac10g01515 483 MobiDBLite consensus disorder prediction 34 116 - -
Phac10g01515 483 MobiDBLite consensus disorder prediction 47 61 - -
Phac10g01515 483 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01515 483 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Phac10g01515 483 Pfam Protein kinase domain 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01515 483 SUPERFAMILY Protein kinase-like (PK-like) 128 413 IPR011009 -
Phac10g01515 483 CDD STKc_CAMK 135 397 - -
Phac10g01515 483 Gene3D Transferase(Phosphotransferase) domain 1 226 411 - -
Phac10g01515 483 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 464 - -
Phac10g01515 483 FunFam CDPK-related kinase 3 128 300 - -
Phac10g01515 483 FunFam CDPK-related kinase 1 129 224 - -
Phac10g01515 483 SUPERFAMILY EF-hand 426 473 IPR011992 -
Phac10g01515 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Phac10g01515 483 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01515 Phac-Chr10 38353511 38361269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01515 1 465 EF-hand Containing Proteins AT3G50530 59.295 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac10g01515 Pkinase 2.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01515 - - gmx:100796256 836.254