Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01513 ATGACTACTGCAATAGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTTCACCGGGACCTTAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGACTTGAAGCTTATTGATTTCGGTCTATCTGACTTCATCCGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTTGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGGATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTTCTGCCTCTGCAGAGGCCAAGGACTTTGTAAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTAAGGGATGAAAGCCGTCCAATCCCTTTAGACATATTAGTTTATAAACTAGTGAAGGCTTATCTTCTTGCAACACCACTCAAACGTGCAGCAGTGAAGGCACTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGGACCCAATAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGCTCTTGTACACAATGCAACTGATGCAATGAGGGAGTCAAGGGTTGTTGACATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTGCAATTAGCACATACCAATTGGAAGCACTTGATAGGTGGGAAGACATTGCCTCAACTGCATTTGAACATTTTGAGACAGAAGGGAACCGTCTGATATCAGTTGAAGAATTGGGCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAATTCTCAAAGACTGGATAAGAAATAGTGATGGAAAGCTTAGCTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACACAGGTAG 1245 0.4201 MTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADLKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPSASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDESRPIPLDILVYKLVKAYLLATPLKRAAVKALSKALPEDELPYLRAQFRLLGPNRDGLISLDNFKMALVHNATDAMRESRVVDIINAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIASTAFEHFETEGNRLISVEELGRELNLGPSAYSILKDWIRNSDGKLSLLGYTKFLHGVTLRSSNPRHR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01513 414 Gene3D - 235 404 - -
Phac10g01513 414 SUPERFAMILY Protein kinase-like (PK-like) 8 240 IPR011009 -
Phac10g01513 414 SMART serkin_6 3 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01513 414 FunFam CDPK-related kinase 1 260 332 - -
Phac10g01513 414 Gene3D Phosphorylase Kinase; domain 1 3 51 - -
Phac10g01513 414 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01513 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Phac10g01513 414 CDD STKc_CAMK 6 223 - -
Phac10g01513 414 ProSiteProfiles EF-hand calcium-binding domain profile. 265 300 IPR002048 GO:0005509
Phac10g01513 414 FunFam CDPK-related kinase 1 52 238 - -
Phac10g01513 414 Pfam Protein kinase domain 8 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01513 414 SUPERFAMILY EF-hand 251 403 IPR011992 -
Phac10g01513 414 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 389 - -
Phac10g01513 414 Gene3D Transferase(Phosphotransferase) domain 1 52 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01513 Phac-Chr10 38353511 38359625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01513 1 414 EF-hand Containing Proteins AT2G46700 80.676 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac10g01513 Pkinase 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01513 - - gmx:100796256 774.237