Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01493 | ATGAGGCCGATTTTTGCTGGGAACTTGGAGTATGATACTCGTCAATCGGAGCTTGAACGGTTGTTTTCAAAGTATGGAAGGATTGACCGCGTGGATATGAAATCTGGTTTTGCTTTTGTCTATTACGAGGATGAGCGTGATGCAGAAGAAGCAATTCGTGCACTTGACAATGTTCCATTTGGTCACGAAAAGCGAAGGCTGTCTGTGGAGTGGGCTAGGGGTGAACGAGGACGTCATCGTGATGGATCAAAGGCAAACCAGAGGCCAACAAAAACCTTGTTTGTGATTAACTTTGATCCAATCCGAACTAGAGTTCGTGATATAGAAAAACATTTTGAACCTTATGGAAATGTTCTTCATGTCCGAATTCGACGGAACTTTGCATTTGTGCAGTTTGAGACACAAGAAGATGCTACTAAAGCTTTAGAGTGTACAAATATGAGTAAGATCCTGGACAGGGTGGTGTCTGTGGAGTATGCTTTGAGGGATGATGGTGAAAGGGGTGACAATTATGATAGTCCTAGACGAGGAGGTTATGATAGATCACCCAGTCCAGTTTATCACAGGCGTCCAAGCCCCGACTATGGTCGTCCACGCAGTCCTGTCTATGATAGGTATAATGGTGGACCAGACAGACGGGTGAGTCCTGATTATGGCAGGGGCATTCCTGATTATGGCAGGCGCAGGAGTCCGGATTATGGAAAGCCCAGGAGTCCTGATTATGGAAAGCCCAGGAGTCCTGGTTATGGAAAGCCCAGGAGTCCTGGTTATGGAAAGCCCAGGAGTCCTGGTTATGGAAAGCCCAGGAGTCCTGGTTATGGGAAACCCAGGAGTCCTGGTTATGGGAAGCCCAGGAGTCCTGATAATGGGAAGCCCAGGAGTCCTGATTATGGGAAGACAAGGAGTCCTGATTATGGGAAGCCCAGGAGTCCTGAATATGGTAGATATCGCAGCCCTTCTCCATTGCGAAGGTCTAGAACGTAA | 984 | 0.4746 | MRPIFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRGGYDRSPSPVYHRRPSPDYGRPRSPVYDRYNGGPDRRVSPDYGRGIPDYGRRRSPDYGKPRSPDYGKPRSPGYGKPRSPGYGKPRSPGYGKPRSPGYGKPRSPGYGKPRSPDNGKPRSPDYGKTRSPDYGKPRSPEYGRYRSPSPLRRSRT* | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01493 | 327 | MobiDBLite | consensus disorder prediction | 164 | 327 | - | - | |
Phac10g01493 | 327 | CDD | RRM2_AtRSp31_like | 92 | 161 | - | - | |
Phac10g01493 | 327 | SUPERFAMILY | RNA-binding domain, RBD | 3 | 165 | IPR035979 | GO:0003676 | |
Phac10g01493 | 327 | SMART | rrm1_1 | 92 | 158 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | SMART | rrm1_1 | 3 | 70 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 91 | 310 | - | - | |
Phac10g01493 | 327 | MobiDBLite | consensus disorder prediction | 222 | 239 | - | - | |
Phac10g01493 | 327 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 91 | 162 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | MobiDBLite | consensus disorder prediction | 289 | 311 | - | - | |
Phac10g01493 | 327 | Gene3D | - | 84 | 173 | IPR012677 | - | |
Phac10g01493 | 327 | Gene3D | - | 1 | 83 | IPR012677 | - | |
Phac10g01493 | 327 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 2 | 74 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 4 | 61 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 93 | 155 | IPR000504 | GO:0003723 | |
Phac10g01493 | 327 | FunFam | Serine/arginine-rich splicing factor RS31 | 85 | 173 | - | - | |
Phac10g01493 | 327 | Pfam | Cornifin (SPRR) family | 230 | 316 | - | - | |
Phac10g01493 | 327 | FunFam | Serine/arginine-rich splicing factor RS31 | 1 | 84 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01493 | Phac-Chr10 | 38080201 | 38083757 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g01493 | 4 | 164 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 23.626 | 3.63e-09 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01493 | K12893 | - | gmx:100797709 | 479.559 |