Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01483 ATGGACGGAATGACTCCCAATTCATGTGCAAGGCTAGTTTTAGAGAAGAAAGCAAGACCACAAGAGCAACTGAATTGTCCAAGGTGCAATTCAACTAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAACCAAGATACTTCTGTAAGACTTGTAGAAGGTATTGGACAGAAGGAGGGTCTCTGAGAAACGTTCCGGTTGGAGGTGGTTCAAGAAAGAACAAGAAGGTCTCTTCAGCAGCAGGAGCCACAGCTTCATCATCATCATCATCATCAAAGGTTCCTGACCTAAATCCCCCAAACCTCTCAGTCTCAGTCTCGGCTCTCTCTTCCCAAAACCCTAAAATAATACATGGTGGCCAAGATCTCAACCTGGCTTTCCCAGCTATGGACAAGTATCATCATGGCATCTCCCCTTATGTTGAGATGCAAAACAGTGACACCACCACTCATCACCAAAACTCCACTTCTTGTTCTGCTCCTCCAACTACTCTTTCAGCTCTTGAGCTGCTAAGGTCCAGCATGGCATCTAGGGGTTTGAACCCTTATGCTCCTTCTTCCTTGATGCCAAACTCAGCAAATAACAATGCTCTCTACCCATCAGGGTTTCCCATGCAAGAGGTTAAACCAAGCCTTAGCTTTTCCTCGGTTGATGGGATGGGAAATAGATCATATGATCACCAGGTCCAAGAGAGGGGTGGCAGAGTTTTGTTCCCTTTTGGAGATGTCAATAAGCAGCTTTCTGCTGCAGGATCAGCTGAAGTGGAACACAATAAAGAACAACAACAACAAGGGAACTCAACTGGATATTGGAGTGGAATGATTGGTGAAGGGACATGGTAA 849 0.4511 MDGMTPNSCARLVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVSSAAGATASSSSSSSKVPDLNPPNLSVSVSALSSQNPKIIHGGQDLNLAFPAMDKYHHGISPYVEMQNSDTTTHHQNSTSCSAPPTTLSALELLRSSMASRGLNPYAPSSLMPNSANNNALYPSGFPMQEVKPSLSFSSVDGMGNRSYDHQVQERGGRVLFPFGDVNKQLSAAGSAEVEHNKEQQQQGNSTGYWSGMIGEGTW* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01483 282 MobiDBLite consensus disorder prediction 79 100 - -
Phac10g01483 282 MobiDBLite consensus disorder prediction 65 100 - -
Phac10g01483 282 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Phac10g01483 282 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Phac10g01483 282 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Phac10g01483 282 MobiDBLite consensus disorder prediction 257 282 - -
Phac10g01483 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 188 IPR045174 GO:0003700|GO:0006355
Phac10g01483 282 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01483 Phac-Chr10 38033945 38036529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01483 16 282 C2C2-Dof Transcription Factor Family AT3G61850 48.789 1.20e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac10g01483 zf-Dof 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01483 - - gmx:778110 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01483 10 38033945 38036529 Phac10g01483 10 38033945 38036529 ECH